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TABLE 1.

Primers used in RT-PCRa

Coding ORF Functionb Primers cDNA length (bp) DNA length (bp)
U33 Capsid protein Primary F, GACAGCGCTGACACTGAAAA 174 174
Primary R, CGGTGATCGGAACAAATTCT
Nested F, CGGTCACGTTGTAGAGATGC 117 117
Nested R, CGGTGATCGGAACAAATTCT
U12 G-protein-coupled receptor Primary F, CACTGTCATTGAGCTGTCCAA 238 327
Primary R, ACCACATGAGCACAAAATCG
Nested F, CACTGTCATTGAGCTGTCCAA 113 202
Nested R, TGAGCGTGATTCCGGTAACT
U39 Glycoprotein B Nested F, CCATACCCTCCTCCTTTTCC 129 129
Nested R, CTTTCCTTATGCCACCAATCC
U27 DNA polymerase processivity factor Primary F, CGGGAACATAGAGAAACGAGAG 209 209
Primary R, GACAAAAACAAACATTCCGCC
Nested F, CTACAGTGACTTTCACGCC 100 100
Nested R, GACAAAAACAAACATTCCGCC
U94 Transactivation, AAV-2 Primary F, GCATACGTGCACCAATCATC 168 168
Primary R, ACGCTCAAGCGGAGAATAAA
Nested F, GCATACGTGCACCAATCATC 100 100
Nested R, GCGCAACGATAGGAAAACAC
Human β-actin Primary F, CAAGAGATGGCCACGGCTGCT 275 340
Primary R, TCCTTCTGCATCCTGTCGGCA
a

ORF, open reading frame; AAV-2, adeno-associated virus type 2.

b

See reference 16.