Table 4.
Method | Estimated False Positive Rate |
Rule of Two (on unnormalized data) | 42.1% |
Rule of Two (on mean loess normalised data) | 3.7% |
Rule of Two (on mean and variance loess normalised data) | 1.4% |
NUDGE | 0.4% |
SAM, EBarrays and t tests are not applicable to single slide data.