Table 1.
AZFc-SNVs and STSs
| SNV or STS | AZFc Site | GenBank Accession Number | SNV Restriction Enzyme | AZFc Amplicon | Ensembl Y DNA Sequence Position(bp) | SNVAllele | RestrictedFragment(bp) |
| SNV: | |||||||
| P1.1 | 26.709.824–26.710.291 | A | 467 | ||||
| AZFc-P1/I | P1.1/P1.2 | G73351 | DdeI | P1.2 | 25.556.438–25.556.845 | B | 284+183 |
| P1.1 | 26.763.718–26.764.249 | A | 531 | ||||
| GOLY/I | GOLGA2LY genes (two copies) | BV012731 | HhaI | P1.2 | 25.501.889–25.502.420 | B | 289+242 |
| g2 | 25.930.869–25.931.339 | A | 470 | ||||
| g3 | 26.335.746–26.336.216 | A | |||||
| BPY2/I | BPY2 genes (three copies) | BV012732 | EcoRV | g1 | 24.388.898–24.389.368 | B | 289+181 |
| g3 | 26.368.272–26.368.812 | A | 541 | ||||
| g1 | 24.356.372–24.356.912 | B | 323+218 | ||||
| TTY4/I |
TTY4 genes (three copies) |
BV012733 |
HaeIII |
g2 |
25.898.343–25.898.883 |
B |
|
| AZFc Site |
GenBankAccessionNumber |
BAC Clonein GenBank |
BACSequencePosition |
Ensembl Y DNA Sequence Position(bp) |
AnnealingTemperature(°C) |
PCR Product(bp) |
|
| STS: | |||||||
| sY1192 | u3 | G67166 | BAC5C5; AC010080 | 52109–52362 | 24.019.703–24.020.304 | 64 | 255 |
| 50f2/C | u3 | Y07728 | BAC5C5; AC010080 | 65711–66830 | 24.033.305–24.034.424 | 65 | 1119 |