Table 1.
Primera |
PCR or RestrictionFragment Size(bp) |
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Mutation | Restriction Enzyme | Forward | Reverse | Wild Type | Mutant |
R702W | MspI | CTTCCTGGCAGGGCTGTTGTC | CATGCACGCTCTTGGCCTCAC | 76+54+24+22 | 130+24+22 |
G908Rb | HhaIb | AAGTCTGTAATGTAAAGCCACb | CCCAGCTCCTCCCTCTTCb | 380 | 242+138 |
1007fs | NlaIV | CCTGCAGTCTCTTTAACTGG | CTTACCAGACTTCCAGGATG | 168 | 128+40 |
P268S | BamHI | TGCCTCTTCTTCTGCCTTCCb | AGTAGAGTCCGCACAGAGAGb | 422 | 247+175 |
M863V | NcoI | CTGTTTGCATGATGGGGGGb | GGGAGATCACAGCATTAGAGb | 212+160 | 372 |
N852S | AluI | CTGTTTGCATGATGGGGGGb | CAGCCGTCAGTCAATTTGTAG |
151 | 129+22 |
IVS8+158 | XhoI | TGCAGTTTTCTTGGGGAGAT | TGTACCTGATCCAGCCCAAT | 125+95 | 220 |
L248R | MspI | TGCCTCTTCTTCTGCCTTCCb | AGTAGAGTCCGCACAGAGAGb | 44+375 | 44+117+258 |
A612T | XcmI | ATGTGCTGCTACGTGTTCTCb | CAGACACCAGCGGGCACAGb | 456 | 155+301 |
Sequencing primers for promoter region | TGTGGTCTCAGGAAGGAAGG |
ACTGGTGAGCCTGGATCTGT |
918 | … | |
Wild Type |
Mutant |
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D113Nc | AGCCCAGGCCGACAGCCA | AGCCCAGGCCAACAGCCA |
… | … | |
I363Fc | GTTGGTCAAGAAGACATCTTC | GTTGGTCAAGAAGACTTCTTC |
… | … | |
L550Vc | ACCCTCCTGCACCTGGGCA | ACCCTCCTGCACGTGGGCA |
… | … |
Modified (or, in the case of dot-blot probes, mutated) bases are underlined.
PCR primers and/or conditions according to or modified from Lesage et al. (2002).
Dot-blot probe.