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. 2004 Mar 5;74(4):623–636. doi: 10.1086/382226

Table 1.

PCR Primers for Amplification, Restriction Analysis, and Sequencing of the CARD15 Mutations and Polymorphisms

Primera
PCR or RestrictionFragment Size(bp)
Mutation Restriction Enzyme Forward Reverse Wild Type Mutant
R702W MspI CTTCCTGGCAGGGCTGTTGTC CATGCACGCTCTTGGCCTCAC 76+54+24+22 130+24+22
G908Rb HhaIb AAGTCTGTAATGTAAAGCCACb CCCAGCTCCTCCCTCTTCb 380 242+138
1007fs NlaIV CCTGCAGTCTCTTTAACTGG CTTACCAGACTTCCAGGATG 168 128+40
P268S BamHI TGCCTCTTCTTCTGCCTTCCb AGTAGAGTCCGCACAGAGAGb 422 247+175
M863V NcoI CTGTTTGCATGATGGGGGGb GGGAGATCACAGCATTAGAGb 212+160 372
N852S AluI CTGTTTGCATGATGGGGGGb CAGCCGTCAGTCAATTTGTAG
151 129+22
IVS8+158 XhoI TGCAGTTTTCTTGGGGAGAT TGTACCTGATCCAGCCCAAT 125+95 220
L248R MspI TGCCTCTTCTTCTGCCTTCCb AGTAGAGTCCGCACAGAGAGb 44+375 44+117+258
A612T XcmI ATGTGCTGCTACGTGTTCTCb CAGACACCAGCGGGCACAGb 456 155+301
Sequencing primers for promoter region TGTGGTCTCAGGAAGGAAGG
ACTGGTGAGCCTGGATCTGT
918
Wild Type
Mutant
D113Nc AGCCCAGGCCGACAGCCA AGCCCAGGCCAACAGCCA
I363Fc GTTGGTCAAGAAGACATCTTC GTTGGTCAAGAAGACTTCTTC
L550Vc ACCCTCCTGCACCTGGGCA ACCCTCCTGCACGTGGGCA
a

Modified (or, in the case of dot-blot probes, mutated) bases are underlined.

b

PCR primers and/or conditions according to or modified from Lesage et al. (2002).

c

Dot-blot probe.