Table 4.
Additional CARD15 Sequence Variants Detected in AJ Controls, AJ Patients with Sporadic and Multiplex CD, SOJ Controls, and SOJ Patients from Multiplex Families with CD
No. with Variant/Total in Group |
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AJ Patients with CD |
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Variant | Haplotype | Multiplex | Sporadic | AJ Controls | SOJ Patientsfrom MultiplexFamilies with CD | SOJ Controls | Notes |
Previously reported missense changes: | |||||||
L248R | A | 2/138 | 0/72 | 1/376 | 0/32 | 0/164 | In one AJ family, unshared by affected sib pair; other AJ family uninformative |
E441K | A | 1/138 | 0/72 | 0/376 | 0/32 | 0/164 | Shared by AJ affected sib pair |
A612T | A | 2/138 | 0/72 | 4/376 | 1/32 | 0/164 | In one AJ family, shared by affected father and son; one AJ family unshared by affected sib pair; one SOJ family uninformative |
R703C | A | 0/138 | 0/72 | 0/376 | 1/32 | 0/164 | Shared by SOJ affected sib pair |
A918D | A | 1/138 | 0/72 | 0/376 | 0/32 | 0/164 | Shared by AJ affected sib pair |
A725G | A | 0/86 | 0/72 | 0/376 | 0/12 | 2/164 | |
M863V | I | 8/138 | 4/72 | 8/492 | 0/32 | 0/164 | |
V955I | A | 3/86 | 5/72 | 1/12 | |||
Previously reported silent or intronic changes: | |||||||
5′ UTR −33 T→G | All, other than A | 27/86 | 22/72 | 5/12 | |||
5′ UTR −15 T→A | A | 2/86 | 0/72 | 0/12 | |||
S178S | A | 25/86 | 30/72 | 5/12 | |||
R459R (SNP6) | All, other than A | 29/86 | 23/72 | 5/12 | |||
R587R (SNP7) | A | 25/86 | 32/72 | 4/12 | |||
A611A | A | 1/86 | 1/72 | 0/12 | |||
IVS4+10 A→C | A | 2/86 | 2/72 | 7/376 | 0/12 | 2/164 | |
IVS8+158 C→T | B, C, E, F, G, I | 50/138 | 15/72 | 72/492 | 6/32 | 24/164 | |
Previously unreported missense changes: | |||||||
D113N | A | 0/138 | 1/72 | 0/376 | 0/32 | 0/164 | |
D357A | A | 0/138 | 1/72 | 1/376 | 0/32 | 0/164 | |
I363F | A | 0/138 | 0/72 | 0/376 | 1/32 | 1/164 | Shared by SOJ affected sib pair |
L550V | A | 0/138 | 0/72 | 0/376 | 1/32 | 0/164 | Unshared by SOJ affected sib pair |
I939V | A | 0/138 | 0/72 | 0/376 | 0/32 | 2/164 |