Table 3.
Estimated Power(%) |
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Complete IBDInformation |
Incomplete IBDInformation, Tmax |
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pD, f0/f1/f2, andNo. of Sibs | Tdom | Trec | Tadd | Tmax | d=2 | d=5 | d=10 |
.2: | |||||||
.065/.162/.162: | |||||||
1 | 85 | 3 | 72 | 79 | 71 | 62 | 49 |
2 | 95 | 4 | 86 | 92 | 86 | 78 | 65 |
.089/.089/.368: | |||||||
1 | 72 | 100 | 98 | 100 | 99 | 98 | 95 |
2 | 83 | 100 | 100 | 100 | 100 | 100 | 98 |
.068/.148/.228: | |||||||
1 | 80 | 32 | 83 | 81 | 74 | 64 | 51 |
2 | 92 | 45 | 93 | 91 | 86 | 78 | 66 |
.5: | |||||||
.015/.128/.128: | |||||||
1 | 27 | 1 | 4 | 19 | 15 | 11 | 9 |
2 | 55 | 1 | 5 | 45 | 40 | 32 | 24 |
.072/.072/.185: | |||||||
1 | 28 | 92 | 86 | 88 | 84 | 76 | 63 |
2 | 40 | 98 | 94 | 96 | 93 | 89 | 78 |
.036/.100/.164: | |||||||
1 | 44 | 51 | 68 | 64 | 55 | 46 | 36 |
2 | 66 | 68 | 83 | 83 | 76 | 67 | 54 |
Note.— Results are based on 10,000 replicates of 500 ASPs. pD is the frequency of disease allele D in the population. fi(i=0, 1, 2) is the penetrance for the genotype with i copies of allele D. Given incomplete IBD information, d (in cM) is the flanking marker density. All models have disease prevalence 10% and single-locus sib relative risk λS=1.1.