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. 2025 Feb 17;26:54. doi: 10.1186/s12859-025-06053-z

Table 2.

The detailed settings for the baseline methods

Method Features Setting
MCS-MKL CS, DAA μ = 2e−3, v = 2e−5, k = 17
FGRMF CS, DAA, DPI μ = 8, λ = 4
idse-HE CS, DAA lr = 1e−3, dropout = 0.1, α = 0.02, λ = 5e−3
Galeano’s DAA lr = 1e−2, λ = 15
Logit MF CS, DAA lr = 1e−2, λ = 1e−4, α = 1, β = 0.2
WPLMF DAA, DPI lr = 1e−2, p = [0.5,0.7,1,1.5,2], q = [2,1.5,1,0.7,0.5], α = 0.9, γ = 2, threshold = 0.8

CS Chemical Structure, DAA Drug-ADR association, DPI Drug-Protein Interaction