Table 4.
Non-redundant EST | tBLASTX E-value | Best BLASTX Descriptor in A. thaliana | Accession Number | |
1 | SmoC-1_01_H05 | 1E-107 | expressed protein | REF:NP_194688 |
2 | SmoC-1_02_C05 | 1E-99 | oligopeptide transporter OPT family protein | REF:NP_192815 |
3 | SmoC-1_01_L23 | 2E-99 | putative Mg-protoporphyrin IX chelatase | REF:NP_196867 |
4 | SmoC-1_05_G17 | 2E-99 | putative caffeoyl-CoA 3-O-methyltransferase | REF:NP_195131 |
5 | SmoC-1_05_K13 | 5E-90 | chloroplast membrane protein (ALBINO3) | REF:NP_180446 |
6 | SmoC-1_01_E02 | 1E-89 | cullin family protein | REF:NP_567243 |
7 | SmoC-1_05_G03 | 7E-87 | putative UDP-galactose/UDP-glucose transporter | REF:NP_563949 |
8 | SmoC-1_05_I19 | 6E-86 | expressed protein | REF:NP_566060 |
9 | SmoC-1_02_N15 | 9E-86 | nicotinate phosphoribosyltransferase family protein | REF:NP_179923 |
10 | SmoC-1_03_I01 | 7E-80 | glycoside hydrolase family 77 protein | REF:NP_181616 |
11 | SmoC-1_cn293 | 4E-77 | amine oxidase family protein | REF:NP_181830 |
12 | SmoC-1_03_C24 | 9E-73 | uridylyltransferase-related protein | REF:NP_564010 |
13 | SmoC-1_02_P14 | 5E-70 | expressed protein | REF:NP_199542 |
14 | SmoC-1_06_P21 | 2E-69 | RNase L inhibitor protein-related | REF:NP_196569 |
15 | SmoC-1_05_G10 | 3E-69 | expressed protein | REF:NP_191746 |
16 | SmoC-1_03_C14 | 1E-66 | putative isoflavone reductase | REF:NP_565107 |
17 | SmoC-1_03_N06 | 6E-65 | transducin / WD-40 repeat family protein | REF:NP_190148 |
18 | SmoC-1_06_M11 | 1E-63 | dehydration stress-induced protein | GB:AAM62648 |
19 | SmoC-1_06_B20 | 1E-60 | putative membrane protein | REF:NP_849987 |
20 | SmoC-1_05_O21 | 2E-60 | paired amphipathic helix repeat-containing protein | REF:NP_186781 |
The tBLASTX E-value of an EST varies with its BLASTX E-value in a small range (e.g. SmoC-1_01_H05 has a tBLASTX E-value of 1E-107 against its homologous A. thaliana EST and a BLASTX E-value of 2E-94 against the translated full length A. thaliana cDNA.). The homology ranking was based on the tBLASTX E-value. The identities of ESTs were putatively described by the A. thaliana protein with the lowest E-value in the BLASTX analysis.