| FGES | Functional gene expression signatures |
| FFPE | Formalin-fixed paraffin-embedded |
| TCGA | The Cancer Genome Atlas |
| TCGA-BRCA | The Cancer Genome Atlas Breast Cancer |
| DADA | Divisive Amplicon Denoising Algorithm |
| FDR | False discovery rate |
| ND | Not detected |
| CLR | Centered log ratio |
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