Table 2.
Primers used in the qPCR for the detection of the free-living amoebae (FLA) in this study.
| FLA species | Primers sequence | DNA fragment (bp) |
|---|---|---|
| Acanthamoeba spp.⁎ | AcantF900 (5`-CCC AGA TCG TTT ACC GTG AA-3`) AcantR1100 (5`-TAA ATA TTA ATG CCC CCA ACT ATC C-3`) AcantProb (5`-JUN-CT GCC ACC GAA TAC ATT AGC ATG G-QSY-3`) |
180 |
| Naegleria fowleri⁎ | NaeglF192 (3`-GTG CTG AAA CCT AGC TAT TGT AAC TCA GT-5`) NaeglR344 (5`-CAC TAG AAA AAG CAA ACC TGA AAG G-3`) NeglProb (5`-VIC-AT AGC AAT ATA TTC AGG GGA GCT GGG C-QSY-3`) |
153 |
| Balamuthia mandrillaris⁎ | BalaF1451 (5`-TAA CCT GCT AAA TAG TCA TGC CAA T-3`) BalaR1621 (5`-CAA ACT TCC CTC GGC TAA TCA-3`) BalaProb (5`-6FAM-AG TAC TTC TAC CAA TCC AAC CGC CA-QSY-3`) |
171 |
| Vermamoeba vermiformis | Hv1227F (5′-TTA CGA GGT CAG GAC ACT GT- 3′)⁎⁎ VermRv (5´ TGCCTCAAACTTCCATTCGC 3′)⁎⁎⁎ VermProb (5`-ABI-TTG ATT CAG TGG GTG GTG GT-QSY-3`)⁎⁎⁎ |
235 |