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. 2005 Aug 10;102(34):12123–12128. doi: 10.1073/pnas.0505482102

Fig. 4.

Fig. 4.

Interactions validated by the SVM runs. Purple lines indicate interactions used in the positive training set. (A) Interactions of translocation channel proteins. (B) Interactions of Emp47 and Emp46. (C) Interactions of Pho88 and Pho84. For clarity, only the direct interaction partners of Pho84 and Pho88 that are identified as true by >50% of the SVM runs are presented; interconnections among proteins in the cluster of less confidence are included. (D) Interactions of sterol metabolism proteins. Only direct interactions of Erg11 found to be true by at least one SVM run are shown. (E) Interactions involved in HDEL-mediated ER retention. Only interactions of Erd1 and Erd2 identified as true by at least one SVM run are presented. (F) Interactions of COPII vesicle proteins. Only interactions of Emp24 supported by all SVM runs are shown. (G) Interactions of Shr3. Only interactions predicted as true by at least half of the SVM runs are shown.