Table 1.

Results of the Homoplasy Test and the Informative Sites Test

	Homoplasy Test		Informative Sites Test
	P value	HR	P value	ISI
complete genome	P < 0.001	0.254	P < 0.001	0.34
gag	P < 0.017	0.565	P < 0.098	0.38
pol	P < 0.015	0.299	P < 0.007	0.41
env	P < 0.043	0.152	P < 0.002	0.42