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. 2005 Aug;25(16):7120–7136. doi: 10.1128/MCB.25.16.7120-7136.2005

TABLE 2.

Half-lives of X-nsP4 in wild-type and mutant EF cellsa

N-terminal residue type Residue Half-life (mm)
Wild-type EFs
UBR1−/− UBR2−/− EFs
No treatment UBR4RNAi D No treatment UBR4RNAi D UBR4RNAi C LucRNAi
Stabilizing Met 75 >120 84 >120 >120 96
Gly >120 64 >120 88
Type 1 Arg 42 >120b 34 72 40 32
His 36 50 >120 50
Type 2 Tyr 40 37 38 >120 56 32
Phe 38 54 >120 39
Leu 40 55 113 41
Type 3 Thr 61 52 99 48
a

Half-life (t0.50-60, min) of X-nsP4 between 0 and 60 min of chase was calculated as follows: t0.50-60 = 50 (%) × 60 (min)/SD0-60 (%). Subsequent decay (SD0-60, %) denotes the ratio of the amount of a labeled X-nsP4 at 60 min of chase to that of the same labeled X-nsP4 at time zero. SD0-60 = 100 − {[X-nsP4]60/[X-nsP4]0} × 100, where [X-nsP4]60 was the amount of 35S-labeled X-nsP4 at 60 min and [X-nsP4]0 was as described in Table 1, footnote a.

b

The amount of 35S-labeled Arg-nsP4 at time zero in UBR4RNAi EFs is significantly low (Fig. 5C and Table 1).