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. 2005 Aug;25(15):6649–6659. doi: 10.1128/MCB.25.15.6649-6659.2005

TABLE 1.

Sense sequence of the oligonucleotides used for EMSAa

Name Location Sequence or probe for EMSA
N1* −96 5′-TGGACTGTTTCCGTTTCTG-3′
N2* −199 5′-GTCCTTTTTTCCCCTTGCA-3′
N3* −236 5′-TCTTCATTTTCCTGGGCTC-3′
N4* −268 5′-AGGCCTGGGAAATTCTGAG-3′
N5* −394 5′-ATTAAAGGGAAAATTTCAT-3′
N6* −554 5′-TTGGACTTTTCCAAACTCT-3′
N7* −584 5′-TTAGACTTTTCCAGCTGAA-3′
N8* −680 5′-CAATGGCTTTCCAGGGGAA-3′
N9 −820 5′-TTCCTTCTTTCCATTGTCT-3′
N10 −896 5′-TCTCTGCTTTCCATTTTTT-3′
N11 −926 5′-GAACTAATTTCCTATTTTC-3′
N12* −1449 5′-ATTGGGTTTTCCCTCCTTA-3′
N13* −1720 5′-CAGTCTCTTTCCTTTGAAA-3′
N14* −1794 5′-CCTTTCCTTTCCCCTTAAG-3′
N15* −1799 5′-TGCTCCCTTTCCTTTCCCC-3′
N16* −1866 5′-TGGTGCCTTTCCTCTCTGC-3′
N17* −2076 5′-AAGAGTCTTTCCCTCTTGT-3′
G1* −185 5′-TTGCATTTTATCAACAGCCC-3′
G2* −299 5′-ATTTTGTAGATAAATTGTCA-3′
G3* −317 5′-CATAGTATTATCACTTAGAT-3′
G4* −377 5′-TTTTAAATGATAATGCCACT-3′
G5* −747 5′-AGCACCTTTATCCATTGAAC-3′
G6* −940 5′-TGTACAAAGATAAGGAACTA-3′
G7 −1208 5′-CACAATTCTATCTTTTTGGA-3′
G8* −1260 5′-CCTTAGTAGATATGTTGGCC-3′
G9* −1325 5′-AGTAATAAGATACAGAGGGC-3′
G10 −1652 5′-TGTTCATGTATCGGACCCAG-3′
G11 −1754 5′-ATGAGAGCTATCTTCACCCA-3′
G12 −1766 5′-ATCTCTGTGATAATGAGAGC-3′
G13 −1775 5′-AGTCAGAATATCTCTGTGAT-3′
G14 −2044 5′-GTGTTAACTATCCCTCCCCT-3′
G15 −2091 5′-AGTCAACATATCTTTAAGAG-3′
IL4* 5′-TACATTGGAAAATTTTATTAC-3′
a

*, used in EMSA. The core consensus DNA binding element is highlighted in boldface text. Oligonucleotides with names beginning with N represent putative NFAT sites, while oligonucleotides beginning with G represent putative GATA binding sites.