TABLE 2.
Origins and classification of animal retrovirus-specific capture probes
| Animal genus | Retrovirus or retroelement | Sequence source (accession no.) | Dot code (grid locus) |
|---|---|---|---|
| Equus | EiAV, equine infectious anemia virus | M87581 | A2 |
| Canis | ERV-L, canine endogenous retrovirus type L | AJ233669 | A3 |
| Bovis | BLV, bovine leukemia virus | K02120 | A4 |
| BoEV, bovine endogenous retrovirus | X99924 | A5 | |
| BIV, bovine immunodeficiency virus | M32690 | A6 | |
| BFV, bovine foamy virus | AY134750 | A7 | |
| ERV-L, bovine endogenous retrovirus type L | AJ233662 | A8 | |
| Columba | RVwp, wood pigeon retrovirus | AJ236133 | A9 |
| Gallus | ALV, avian leukosis virus | Z46390 | A10 |
| EAV-HP, endogenous avian retrovirus type HP | AJ292966 | A11 | |
| Rattus | RLV, rat leukemia virus | M77194 | B2 |
| ERV-L, rat endogenous retrovirus type L | AJ233604 | B3 | |
| Sus | PERV, porcine endogenous retrovirus, types A,B,C | AF038600 | B4 |
| Ovis | JSRV, Jaagsiekte retrovirus | A27950 | B5 |
| OvEV-2, ovine endogenous retrovirus | X99932 | B6 | |
| Mustela | MiEV-1, mink endogenous retrovirus | X99931 | B7 |
| Felis | FIV, feline immunodeficiency virus | M59418 | B8 |
| FIV2, feline immunodeficiency virus type 2 | U56928 | B9 | |
| FeLV, feline leukemia virus | L06140 | B10 | |
| FeSFV, feline syncytium-forming virus | U78765 | B11 | |
| ERV-L, feline endogenous retrovirus type L | AJ233664 | B12 | |
| Mus | MuRVY, murine endogenous retrovirus from chr Y | X87639 | C1 |
| MuRRS, murine retroviral-related sequence | X02487 | C2 | |
| VL30, murine virus-like element encoding 30S RNA | AF053745 | C3 | |
| VL30-like, murine virus-like element for 30S RNA-like | AL844168 | C4 | |
| IAP-2, intracistemal particle type 2 | U58494 | C5 | |
| IAP-1, intracistemal particle type 1 | X87638 | C6 | |
| MMTV, mouse mammary tumor virus | M15122 | C7 | |
| MMTV-like murine retroelement | AL606472 | C8 | |
| MLV, murine leukemia virus | J02255 | C9 | |
| chr x, unclassified murine retroelement on chr X | AL672245 | D5 | |
| chr 15, unclassified murine retroelement on chr 15 | AL513352 | D6 | |
| mRE1, unclassified murine retroelement | XM_143828 | D7 | |
| mRE2, unclassified murine retroelement | XM_136338 | D8 | |
| mRE3, unclassified murine retroelement | XM_146956 | D9 | |
| mRE4, unclassified murine retroelement | XM_141084 | D10 | |
| ERV-L, murine endogenous retrovirus type L | Y12713 | D11 | |
| MusD (1/2), type D-like murine endogenous retrovirus | AF246632/3 | D12 | |
| Macaca | MPMV, Mason-Pfizer monkey virus | M12349 | C10 |
| Hylobates | GaLV, gibbon ape leukemia virus | M26927 | C11 |
| Papio | BaEV, baboon endogenous retrovirus | D10032 | C12 |