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. Author manuscript; available in PMC: 2025 Mar 27.
Published in final edited form as: Methods. 2019 Aug 6;171:41–61. doi: 10.1016/j.ymeth.2019.07.023

Table 2.

Decellularization Methods for Central Nervous System (CNS) Applications.

Application Study model Source Tissue Additional
Components
Post Processing Decellularization Method Notable Results References
# Step Time RPM
SCI in vitro Rat spinal cord N/A N/A Mechanical tissue separation Tissue segmented Good ECM structure preservation. Constructs contained laminin, collagen, and fibronectin and show increased neural cell adhesion and proliferation. [130]
2x 1% Triton X-100 3 h yes*
1% Deoxycholate Stored at 4 °C in PBS 3 h yes*
in vitro Rat spinal cord Genipin crosslinker and glutaraldehyde crosslinker Lyophilized, immersed in crosslinker solutions, lyophilized again, and sliced into discs for culturing Mechanical tissue separation Tissue segmented Genipin was equivalent in structural properties and superior in biocompatibility to glutaraldehyde. Degradation of the genipin crosslinked scaffold was around 20% in trypsincontaining buffer over 14 days. Genipen increased proliferation and ECM secretion. [15,130]
2x 1% Triton X-100, 1 h media changes 3 h 100
1% Deoxycholate, 1 h media changes Lyophilization 3 h 100
5 mg/mL crosslinker immersion at 37 °C Lyophilization Cobalt-60 irradiation for sterilization Stored dry at −20 °C 24 h
Rat spinal cord hemisection up to 8 weeks Rat thoracic spinal cord human umbilical cord MSCs Freeze dried and gamma irradiated Mechanical tissue separation hUCB-MSC addition to ECM scaffolds showed increased motor function recovery. Increases in axon sprouting, myelination, and oligodendrocyte migration were observed. [130,133]
2x Tissue segmented 1% Triton X-100 3 h yes*
1% Deoxycholate 3 h yes*
Freeze-dried Gamma irradiation 24 h
Rat spinal cord hemisection Rat paravertebral muscle N/A N/A 1x 3% Triton X-100 2d Parallel and linear axonal spouting was observed and axon survival was increased. [118,181]
0.1% SDS 2d
PBS 1d
Subcutaneous rat implant model up to 1 week Rat sciatic nerve N/A N/A Method 1: Detergent For methods 1 and 2, nuclear content was eliminated but some myelin was detected. Immunogenicity was lower than untreated sciatic nerve in methods in all 3 methods with method 3 showing the least MHC II presentation. Mechanical properties of normal sciatic nerve were preserved. [138]
2x 3% Triton X-100 12 h
4% Deoxycholate Stored at 4 °C in PBS 24 h
Method 2: Detergent/Enzyme
0.5% Triton X-100 48 h yes*
DNase and RNase at 37 °C 12 h
Method 3: Enzyme
Hypotonic solution rinse at 4 °C 12 h
Frozen at −80 °C 6 h
Thawed at 37 °C 30 m
0.05% pancreatin 6 h
DNase and RNase 12 h
in vitro Rat spinal cord N/A Triton X-100 Deoxycholate Varied This study observed effects of agitation on decellularization and found 120 RPM to be optimal for spinal cord. [141]
Varied
Rat spinal cord hemisection model up to 14 days Rat spinal cord bFGF and HP (heparin modified poloxamer) lyophilized and mixed with bFGF and HP 1x 1% triton X-100 at 4 °C 12 h 120 Inclusion of HP-bFGF increases PC12 cell survival by 50%. bFGF reduced glial scarring and increased recovery. [140]
8 h 120
4.0% sodium deoxycholate at 4 °C
10x 0.01% PBS elution rinse at 4 °C 10m 60
in vitro, PC12 cell line up to 7 days in culture Porcine brain N/A Comminuted into < 1 mm particles, pepsin/HCl solubilized, gelled via neutralization and dilution 1x Freeze/Thaw cycle at −80 °C Longitudinal quartering of tissue 16 h This study observed the effects of various nerve tissue sources. Brain derived ECM scaffolds showed significantly greater neurite extension length. Otherwise spinal cord, brain, and UBM showed equivalent benefits. [128,134,139]
1x Type 1 water at 4 °C 16 h 60 120 for brain/200 for spinal cord/nerve
Porcine spinal cord 0.02% Trypsin/0.05% EDTA at 37 °C 1 h
3% Triton X-100 1 h
1.0 M Sucrose 15 m
Porcine optic nerve 4% Deoxycholate 1 h
1% Peracetic acid in 4% ethanol Lyophilized and stored dry 2 h
Rat acute SCI up to 8 weeks post-injury Porcine spinal cord UBM hMSCs Same gelation process as Crapo et al. 2012 above Same method as Crapo et al. 2012 above with additional steps. This study compared SC ECM with UBM hydrogels. Equivalence was found in most categories. hMSCs added to SC ECM found to have little effect. SC ECM and UBM both found to significantly modulate the immune response. [128,137]
Digested 1.0 mg/mL pepsin, 0.01 M HCl Neutralized 0.1 M NaOH, 10x PBS
in vitro with rat SCs, in vivo rat SCI for 14 days Rat sciatic nerve SCs Lyophilized, digested, applied as hydrogel SB-10 in 50 mM sodium/10 mM phosphate buffer 0.14% Triton X-200/0.06 mM SB-16 in 50 mM sodium/10 mM phosphate 200 uL chondroitinase ABC at 37 °C 16 h The ECM hydrogel supported axon growth, SC survival, and axon myelination. Locomotive recovery was increased, and no chronic immune response was observed. [150,151,163]
TBI Mouse CCI model up to 35 days Porcine brain N/A Lyophilized and reconstituted with PBS Same method as Crapo et al. 2012 above. ECM showed reduced glial scarring post-injury as well as reduced neurodegeneration and reduced lesion volume. [128,139]
Controlled cortical impact rat model up to 26–28 days. Porcine UBM NSCs cultered in UBM hydrogel prior to injection Same gelation process as Crapo et al. 2012 above Mechanical separation of the luminal surface 1 M saline rinse UBM hydrogels reduced CNS tissue loss and mitigated losses in memory, cognition, and motor faculties. UBM and UBM + NSCs showed significant benefits, with reduction of loss in memory and cognition being significant with the inclusion of NSCs. [166,167]
1x 0.1% Peracetic acid/4% ethanol Lyophilization 2 h
Solubiliztion in 1 mg/mL pepsin/0.01 M HCl Frozen at −20 °C for storage 2d
Chick embryo chorioallantoic membrane Whole rat brain N/A 2x Antibiotic/Antimycotic rinse The observed angiogenic response was comparable to FGF-2 application. Little to no inflammatory response was seen. [135,182]
4x Freeze/Thaw cycle 2x 4% Sodium deoxycholate 1 h
2000 kU DNase I in 1 M Na CL 15 m
Storage at 4 °C in PBS
in vitro Whole Rat Brain N/A Lyophilized, mixed with gelatin, electrospun, and then genipin crosslinked Antibiotic/Antimycotic rinse A cytocompatible scaffold was produced that, when cultured with allogeneic rat mSCs, showed enhanced differentiation potential. [127,135]
4x Freeze/thaw cycle
1x 1% Triton X-100 1 h 60
4.0% deoxycholate 1 h 60
2000 KU DNase in 1 M NaCl Stored in PBS 1% antibiotic/antimycotic 1 h 60
In vitro characterization with NSCs and subcutaneous and intracranial implantation in a rat model up to 4 weeks Mouse Cerebellum N/A N/A Transcardial 1% SDS infusion (pre-harvest) 5 m Scaffolds retained neurosupportive proteins and increased migration and proliferation of NSCs in coculture. When compared to UBM intracranial implants, advantages were seen in cerebellum-derived ECM scaffolds. [120]
1x 1% SDS 1 h 100
0.02% Trypsin/0.05% EDTA 30 m 60
1% Triton X-100 1 h 100
1 M Sucrose 15 m 60
Antibiotic Rinse Stored in PBS 3d
In vitro with iPS cells Halved rat whole brain N/A 3x 0.1% SDS in PBS with 1% antibiotic/antimycotic 24 h Decellularized brain scaffolds induced neural differentiation pathways when cultured with iPS cells. [119]
1x Centrifugation in 50 mL conical tubes 5 m 10,000
10x PBS solution centrifugation (SDS removal) 5 m 10,000
3D in vitro culturing Fetal and young adult porcine brain N/A Lyophilized and gelled following various manufacturer instructions for Hydromatrix, Puramatrix, and HyStem C Mechanical separation of the dura mater Neural network formation was enhanced in the presence of fetal and young adult ECM compared to collagen alone in 3D culture. [128,136]
1x 0.05% Trypsin/EDTA with 0.2% DNase at 37 °C 1 h
3% Triton X-100 with 0.2% DNase 1 h/30 m
1 M Sucrose 15 m
4% sodium deoxycholate 1 h/15m
0.1% peracetic acid/4% ethanol Lyophilization and storage at −20 °C 2 h
in vitro 3D culturing with NSCs up to 7 weeks Mouse brain 1.5 mm sections N/A N/A 1x 4% sodium deoxycholate 14 h 150 NSCs labeled with GFP showed continued growth over 7 weeks cultured on brain ECM sections, and, when exposed to mitogenic stimuli, retained their NSC phenotype. [129]
40 kU/mL DNase 1 h 150
deionized water 150 4h
3% Triton X-100 2 h
150 40 kU/mL DNase 2x 1 h 150
deionized water 150 4h
4% sodium deoxycholate 150 12 h
40 kU/mL DNase 1 h 150
deionized water 2 h 150
3% Triton X-100 2 h 150
40 kU/mL DNase 1 h 150
in vitro Rat cerebral cortex Genipin crosslinker Freeze/thaw Triton X-100 Deoxycholate DNase and RNase Genipin crosslinker Genipen increased pore sizes of scaffolds. Fibronectin and basement membrane were weakly retained but laminin was strongly retained. [131]
Stroke Rat stroke model up to 14 days and 12 weeks Porcine UBM N/A Same gelation process as Crapo et al. 2012 above 1x Mechanical delamination 0.1% Peracetic acid/4% ethanol Debris removal via PBS rinses Lyophilization Solubilization in 1 mg/mL pepsin/0.01 M HCl Frozen at −20 °C for storage 2 h 300 Injection of the UBM hydrogel increased cell proliferation and density at the injury site interface with some penetration. However, at 12 weeks there were no significant differences in scar formation. [164,165]
Parkinson's Parkinson's Disease model rats up to 20 days Rat brain bFGF N/A Transcardial PBS perfusion during harvest Sustained release of bFGF from ECM scaffolds increased cell survival and behavioral recovery. [127,132]
1x 3% Triton X-100 12 h 120
4% deoxycholic acid sodium salt 24 h 120
0.1% peracetic acid/4% ethanol Stored in PBS 1% antibiotic/antimycotic 3 h 120