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Manhattan and Q-Q plots of the GWAS for pathotype 77–9, generated using mrMLM v4.0.2. Loci identified using multiple methods are indicated by pink dots on the Manhattan plot, whereas those detected by a single method are marked with dark blue dots. The remaining two dots in the Manhattan plot, light blue and green colour, correspond to SNP markers, alternatively present on 14 chromosomes of tetraploid wheat. The horizontal line represents a critical LOD score of 3.0
