TABLE 1.
General characteristics of the genomes of M. hyopneumoniae strains J and 7448 and M. synoviaea
Characteristic | Mhy-J | Mhy-P | Msy |
---|---|---|---|
Total length (base pairs) | 897,405 | 920,079 | 799,476 |
G+C content (%) | 28 | 28 | 28 |
Total no. of CDSs | 679 | 681 | 694 |
Genome constituting coding regions (%) | 88 | 88 | 91 |
Average CDS length (base pairs) | 1,178 | 1,190 | 1,058 |
No. of known proteins | 412 | 421 | 464 |
No. of conserved hypothetical proteins | 109 | 105 | 167 |
No. of hypothetical proteins | 158 | 155 | 63 |
No. of rRNAs | |||
16S | 1 | 1 | 2 |
23S | 1 | 1 | 2 |
5S | 1 | 1 | 3 |
No. of tRNAs | 30 | 30 | 34 |
No. of insertion sequencesb | |||
IS3 | 2 | 0 | 0 |
tMH | (4) | 2 (8) | 0 |
ISMhp1 | 14 | 11 | 13 |
Abbreviations: Mhy-J, M. hyopneumoniae strain J; Mhy-P, M. hyopneumoniae strain 7448; Msy, M. synoviae.
Number of copies of different insertion sequence families. The number of defective copies is shown in parentheses.