TABLE 5.
Horizontally transferred regions between M. synoviae and M. gallisepticum
| Species and region | Region
|
Product | ||
|---|---|---|---|---|
| Start | End | Length | ||
| M. synoviae | ||||
| 1 | 41155 | 47098 | 5943 | ABC transporter, signal peptidase I, elongation factor EF-G, conserved hypothetical proteins |
| 2 | 80242 | 80947 | 705 | Transposase |
| 3 | 185374 | 186994 | 1620 | Conserved hypothetical protein |
| 4 | 221238 | 224926 | 3688 | Putative sialidase, glyceraldehyde 3-phosphate dehydrogenase |
| 5 | 311024 | 311541 | 517 | Transposase |
| 6 | 320763 | 325527 | 4764 | Conserved hypothetical proteins |
| 7 | 533311 | 534827 | 1516 | Conserved hypothetical proteins (compositional bias) |
| 8 | 535709 | 537101 | 1392 | Conserved hypothetical proteins (compositional bias) |
| 9 | 537179 | 537545 | 366 | Conserved hypothetical proteins (compositional bias) |
| 10 | 546230 | 547733 | 1503 | Conserved hypothetical proteins (compositional bias) |
| 11 | 549723 | 554763 | 5040 | Conserved hypothetical proteins (compositional bias) |
| 12 | 693080 | 693615 | 535 | Conserved hypothetical protein (transposase) |
| 13 | 693616 | 695386 | 1770 | Conserved hypothetical proteins (transposase) |
| 14 | Hemagglutinin cluster (codon bias)a | |||
| Total | 29359 (3.21)b | |||
| M. gallisepticum | ||||
| 1 | 356997 | 362986 | 5989 | ABC transporter, signal peptidase I, elongation factor EF-G, conserved hypothetical proteins |
| 2 | 372501 | 373205 | 704 | Transposase |
| 3 | 370747 | 372370 | 1623 | Conserved hypothetical protein |
| 4 | 771294 | 774961 | 3667 | Putative sialidase, glyceraldehyde 3-phosphate dehydrogenase |
| 5 | 400149 | 400682 | 533 | Transposase |
| 6 | 365139 | 369905 | 4766 | Conserved hypothetical proteins |
| 7 | 969572 | 971087 | 1515 | Conserved hypothetical proteins |
| 8 | 951348 | 952740 | 1392 | Conserved hypothetical proteins |
| 9 | 950904 | 951270 | 366 | Conserved hypothetical proteins |
| 10 | 947932 | 949436 | 1504 | Conserved hypothetical proteins |
| 11 | 349890 | 354930 | 5040 | Conserved hypothetical proteins |
| 12 | 398943 | 399492 | 549 | Conserved hypothetical protein (transposase) |
| 13 | 401897 | 403633 | 1736 | Conserved hypothetical protein (transposase) |
| 14 | Three hemagglutinin CDSsa | |||
| Total | 29384 (2.58) | |||
a
Due to the large extent of recombination in hemagglutinin clusters, a single region of horizontal transfer could not be identified. However, region 14 in this study contains CDSs listed in Table 1 at http://www.brgene.ncc.br/finalMS/table1 as cluster number 2.
b
The genome percentage is shown in parentheses after the total length.