TABLE 2.
Biosynthetic Gene Cluster from antiSMASH.
| Region | Type | From | To | Most similar known cluster | Type from most simiilar known cluster | Similarity | Technique |
|---|---|---|---|---|---|---|---|
| 1.1 | T1PKS | 173,653 | 262,468 | catenulisporolides | NRP + Polyketide | 12% | Illumina |
| 1.2 | T3PKS | 972,718 | 1,013,770 | loseolamycin A1/loseolamycin A2 | Polyketide | 92%/88% a | Both |
| 1.3 | thioamide-NRP | 1,165,443 | 1,214,791 | cadaside A/cadaside B | NRP | 19% | Illumina |
| 1.4 | terpene | 1,632,755 | 1,652,207 | isorenieratene | Terpene | 25%/25% a | Both |
| 1.5 | terpene | 1,735,876 | 1,756,185 | phosphonoglycans | Saccharide | 3% | Illumina |
| 1.9 | T1PKS | 3,818,978 | 3,889,418 | quinolidomicin A | Polyketide | 45%/67% a | Both |
| 1.10 | NI-siderophore | 3,941,102 | 3,951,331 | FW0622 | Other | 50% | Illumina |
| 1.11 | NRPS-like,NRPS,T1PKS,PKS-like | 3,956,633 | 4,058,605 | sungeidine C/sungeidine B/sungeidine D/sungeidine H/sungeidine A/sungeidine E/sungeidine F/sungeidine G | Polyketide | 100% | Illumina |
| 1.12 | NRPS-like,NRPS,T1PKS | 4,153,951 | 4,219,351 | crochelin A | NRP + Polyketide | 12% | Illumina |
| 1.13 | terpene | 4,832,538 | 4,853,269 | nocathiacin | RiPP:Thiopeptide | 4%/4% a | Both |
| 1.14 | T2PKS | 5,027,025 | 5,098,322 | formicamycins A-M | Polyketide | 18% | Illumina |
| 1.15 | oligosaccharide, terpene | 5,268,386 | 5,304,696 | lobosamide A/lobosamide B/lobosamide C | Polyketide | 13% | Illumina |
| 1.16 | T2PKS,oligosaccharide, other,NRPS | 5,309,290 | 5,436,713 | cinerubin B | Polyketide:Type II polyketide | 80%/74% | Both |
| 1.17 | NI-siderophore | 5,616,661 | 5,629,872 | peucechelin | NRP | 10% | Illumina |
| 1.18 | terpene,RiPP-like | 5,837,876 | 5,861,979 | lymphostin/neolymphostinol B/lymphostinol/neolymphostin B | NRP + Polyketide | 33% | Illumina |
| 1.19 | terpene | 5,994,482 | 6,015,432 | tetrachlorizine | Polyketide | 13% | Illumina |
| 1.20 | other, ladderane,NRPS, arylpolyene | 6,201,575 | 6,311,984 | kedarcidin | NRP + Polyketide:Iterative type I polyketide + Polyketide:Enediyne type I polyketide | 13%/6% | Both |
| 6.1 | NRPS-like,T1PKS | 1 | 37,77 | quinolidomicin A | Polyketide | 28,%/67% | Both |
| 2.1 | RiPP-like | 136,664 | 147,482 | lymphostin/neolymphostinol B/lymphostinol/neolymphostin b | Polyketide + NRP | 15% | MinION |
| 2.5 | NI-siderophore | 4,182,055 | 4,194,725 | peucechelin | NRP | 10% | MinION |
| 3.2 | NRPS-like | 407,718 | 448,468 | sarpeptin A/sarpeptin B | NRP | 25% | MinION |
| 3.4 | oligosaccharide, terpene | 530,94 | 565,187 | brasilicardin A | Terpene + Saccharide | 38% | MinION |
| 3.5 | T2PKS,NRPS-like | 732,357 | 804,659 | pradimicin-A | Polyketide | 17% | MinION |
| 3.7 | NRPS | 1,520,332 | 1,559,968 | bleomycin A2/bleomycin B2 | NRP + Polyketide + Saccharide | 14% | MinION |
| 3.9 | T1PKS | 1,799,831 | 1,841,948 | rakicidin A/rakicidin B | NRP:Cyclic depsipeptide + Polyketide:Modular type I polyketide | 40% | MinION |
| 3.10 | NI-siderophore | 1,859,147 | 1,870,220 | putrebactin/avaroferrin | Other | 50% | MinION |
a
Similarity data from Illumina and MinION, respectively.