Table 2.
Description of transcription factors binding sites, whose activity was experimentally proven, represented in the group of human promoter sequences composing the Mixed signals benchmark dataset
| Transcription factor | Sequence elements | |||
|---|---|---|---|---|
| Number | Average length | Minimum length | Maximum length | |
| AP-1 | 9 | 9.6 | 7 | 17 |
| c-Myc | 4 | 8.0 | 6 | 14 |
| CREB | 4 | 8.5 | 8 | 10 |
| CRE-BP1 | 7 | 8.3 | 7 | 10 |
| CTF | 4 | 6.8 | 6 | 7 |
| E2F | 5 | 9.0 | 8 | 12 |
| E2F-1 | 5 | 9.8 | 8 | 12 |
| HIF-1 | 7 | 7.4 | 6 | 8 |
For each transcription factor, the number of binding sites in the considered group of sequences, their average, minimum and maximum length are reported.