Table 2.
Comparison of SHIFT-SP protocol with MagMAX™ DNA Multi-Sample Kit and QIAamp® DNA Blood Mini Kit.
| NA extraction method | Average total yield in ng | Method TAT& | Eluate volume | Concentration of NA in the final eluate |
|---|---|---|---|---|
| Experiment 1: SHIFT-SP (n = 4) | 112.8 (24.5) | ~ 6 – 7 min | 20 µL* | 5.64 ng/µL |
| Experiment 2: MagMAX™ DNA Multi-Sample Kit (n = 3) | 105.7 (5.0) | ~ 36 min | 200 µL | 0.53 ng/µL |
| Experiment 3: QIAamp® DNA Blood Mini Kit (n = 3) | 57.8 (6.2) | ~ 14 – 15 min | 200 µL | 0.29 ng/µL |
The yield from SHIFT-SP is comparable with MagMAX™ DNA multi-sample kit protocol, where nearly all the spiked DNA (100 ng) is retrieved after extraction. SHIFT-SP is the shortest of the three and yields a concentrated sample. Error values in brackets are SD. *10 µL eluate is mixed with 10 µL elution wash. &Time from lysed sample to NA. p-value 0.31 is not significant between average total yields of SHIFT-SP and MagMAX™ DNA Multi-Sample kit. p-value 0.01 is significant between average total yields of SHIFT-SP and QIAamp® DNA Blood mini Kit.