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. 2005 Feb 15;76(4):647–651. doi: 10.1086/429226

Table 1.

Results of Genomewide Scan and Additional Genotyping on Chromosome 12[Note]

No. of Families Used
No. of Subjects Genotyped
LOD Score at Markera
Scoring Function and Data Set As OriginallyPresented After Split Affected Unaffected D1S1677 D5S408 D7S559 PAH
Shomoz, with overrelated individuals 44 47 144 55 1.59 1.15 1.67 3.11
Shomoz, without overrelated individuals 41 43 130 48 1.40 .92 2.20 3.45
Sall, with overrelated individuals 40 43 140 51 2.93 2.80 .09 3.11
Sall, without overrelated individuals 37 39 126 44 2.77 2.41 .09 3.28
Shomoz, with overrelated individuals, with additional genotyping 46 49 160 60 4.61
Shomoz, without overrelated individuals, with additional genotyping 43 45 143 53 5.20
Sall, with overrelated individuals, with additional genotyping 43 46 157 56 3.51
Sall, without overrelated individuals, with additional genotyping 40 42 140 49 3.64

Note.— Regions achieving LOD scores ⩾2 in at least one analysis. Shown are results with the Shomoz or Sall scoring function, including or excluding the individuals “corrected” for overrelatedness, and, for chromosome 12, including additional genotyping.

a

The scores presented are exactly at the marker listed for D1S1677, D5S408, and D7S559. In the case of PAH, the score shown is exactly at the marker when Shomoz is used; when Sall is used, however, the score shown is the largest in the region, which was found between D12S1041 (104.12 cM) and PAH (109.47 cM) in the genomewide scan and between PAH and D12S78 (111.87 cM) when extra markers were added to this region.