Table 1.
DIA window settings
| MSType | CycleId | 1/K0Begin[Vs/cm2] | 1/K0End[Vs/cm2] | StartMass[m/z] | EndMass[m/z] | CE[eV] | Window |
|---|---|---|---|---|---|---|---|
| PASEF | 1 | 0.87 | 1.7 | 623.75 | 642.38 | - | 1.1 |
| PASEF | 1 | 0.4 | 0.87 | 300.53 | 430.23 | - | 1.2 |
| PASEF | 2 | 0.9 | 1.7 | 642.38 | 662.33 | - | 2.1 |
| PASEF | 2 | 0.4 | 0.9 | 430.23 | 460.58 | - | 2.2 |
| PASEF | 3 | 0.91 | 1.7 | 662.33 | 684.36 | - | 3.1 |
| PASEF | 3 | 0.4 | 0.91 | 460.58 | 481.74 | - | 3.2 |
| PASEF | 4 | 0.92 | 1.7 | 684.36 | 705.83 | - | 4.1 |
| PASEF | 4 | 0.4 | 0.92 | 481.74 | 499.26 | - | 4.2 |
| PASEF | 5 | 0.92 | 1.7 | 705.83 | 727.91 | - | 5.1 |
| PASEF | 5 | 0.4 | 0.92 | 499.26 | 515.25 | - | 5.2 |
| PASEF | 6 | 0.93 | 1.7 | 727.91 | 748.92 | - | 6.1 |
| PASEF | 6 | 0.4 | 0.93 | 515.25 | 529.33 | - | 6.2 |
| PASEF | 7 | 0.94 | 1.7 | 748.92 | 772.37 | - | 7.1 |
| PASEF | 7 | 0.4 | 0.94 | 529.33 | 543.28 | - | 7.2 |
| PASEF | 8 | 0.95 | 1.7 | 772.37 | 801.42 | - | 8.1 |
| PASEF | 8 | 0.4 | 0.95 | 543.28 | 556.98 | - | 8.2 |
| PASEF | 9 | 0.96 | 1.7 | 801.42 | 843.91 | - | 9.1 |
| PASEF | 9 | 0.4 | 0.96 | 556.98 | 573.61 | - | 9.2 |
| PASEF | 10 | 0.98 | 1.7 | 843.91 | 903.48 | - | 10.1 |
| PASEF | 10 | 0.4 | 0.98 | 573.61 | 588.32 | - | 10.2 |
| PASEF | 11 | 1 | 1.7 | 903.48 | 975.48 | - | 11.1 |
| PASEF | 11 | 0.4 | 1 | 588.32 | 605.41 | - | 11.2 |
| PASEF | 12 | 1.09 | 1.7 | 975.48 | 1340.62 | - | 12.1 |
| PASEF | 12 | 0.4 | 1.09 | 605.41 | 623.75 | - | 12.2 |
DIA, data-independent acquisition.