Table 3.
Alternative splicing analysis of glycolysis-related genes
Group | Gene | AE | IR | MSKIP | SKIP | TSS | TTS | XAE | XMSKIP | XSKIP |
---|---|---|---|---|---|---|---|---|---|---|
0.16%DMSO | ALDOA | 12 | 0 | 4 | 38 | 22 | 3 | 0 | 0 | 10 |
65 μM | ALDOA | 4 | 0 | 2 | 4 | 8 | 1 | 0 | 0 | 0 |
0.16%DMSO | ENO3 | 4 | 6 | 2 | 14 | 27 | 3 | 4 | 0 | 0 |
65 μM | ENO3 | 0 | 0 | 6 | 2 | 19 | 3 | 0 | 0 | 0 |
0.16%DMSO | GPI | 4 | 0 | 2 | 12 | 12 | 2 | 0 | 0 | 0 |
65 μM | GPI | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
0.16%DMSO | LDHA | 0 | 0 | 16 | 36 | 22 | 3 | 12 | 10 | 18 |
65 μM | LDHA | 0 | 0 | 14 | 34 | 23 | 3 | 8 | 8 | 14 |
0.16%DMSO | LDHB | 0 | 0 | 0 | 0 | 11 | 3 | 0 | 0 | 0 |
65 μM | LDHB | 0 | 0 | 0 | 0 | 10 | 3 | 0 | 0 | 0 |
0.16%DMSO | PGK1 | 0 | 0 | 0 | 0 | 12 | 3 | 0 | 0 | 0 |
65 μM | PGK1 | 0 | 0 | 0 | 0 | 12 | 3 | 0 | 0 | 0 |
0.16%DMSO | PGM1 | 0 | 0 | 0 | 0 | 10 | 3 | 0 | 0 | 0 |
65 μM | PGM1 | 0 | 0 | 0 | 0 | 10 | 3 | 0 | 0 | 0 |
0.16%DMSO | PKM | 0 | 0 | 0 | 22 | 36 | 9 | 0 | 18 | 34 |
65 μM | PKM | 0 | 0 | 0 | 16 | 35 | 9 | 0 | 18 | 28 |
0.16%DMSO | TPI1 | 0 | 0 | 0 | 0 | 12 | 2 | 0 | 0 | 0 |
65 μM | TPI1 | 0 | 0 | 0 | 0 | 18 | 3 | 0 | 0 | 0 |
Abbreviations: AE alternative exon ends, XAE approximate AE, IR intron retention, TSS transcription start site, TTS transcription terminal site, SKIP skipped exon, XSKIP approximate SKIP, MSKIP multi-exon SKIP, XMSKIP approximate MSKIP