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. 2025 Apr 1;82:103625. doi: 10.1016/j.redox.2025.103625

Table 2.

Gene ontology (GO) enrichment analysis of the biological processes, molecular functions, and cellular components from the analyzed clusters containing secretome proteins that were regulated by incubation with urate for 24 h.

Cluster 1 (n = 123)
Cluster 2 (n = 21)
Biological process # of proteins -log(p-value) Biological process # of proteins -log(p-value)
inflammatory response regulation 26 6.39 extracellular matrix protein 6 5.94
cellular component organization 34 4.05 cell adhesion 9 2.52
cytokine signaling 14 2.43 response to wounding 6 2.05
RNA processing 17 2.39 extracellular matrix 5 1.92
regulation of proteolysis 12 1.48 cell projection 8 1.83
protein folding 5 1.45 cell migration 7 1.72
Molecular function # of proteins -log(p-value) Molecular Function # of proteins -log(p-value)
cadherin binding 21 11.66 extracellular matrix 6 4.12
cell adhesion molecule binding 22 8.60 calcium ion binding 7 2.06
protein binding 114 7.92 proteoglycan binding 3 1.95
nucleic acid binding 51 5.15 fibronectin binding 3 1.91
actin binding 15 4.45 peptidase activator activity 3 1.62
unfolded protein binding 6 1.81 laminin interactions 2 1.34
Cellular component # of proteins -log(p-value) Cellular component # of proteins -log(p-value)
extracellular space 78 29.44 extracellular region 18 6.43
cytoplasm 108 10.72 basement membrane 5 4.77
focal adhesion 20 9.68 lysosomal lumen 4 3.28
cell junction 36 6.17 vesicle 13 2.52
secretory vesicle 24 6.03 cell adhesion 3 2.46
nuclear lumen 50 4.26 laminin complex 2 2.25