TABLE 2.
Similarities between NS5A regions (aa 2212 to 2313) used for constructing synthetic genes
| Protein | % Similarity with protein:
|
|||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1b-1 | 1b-2 | 1b-3 | 1c | 2a | 2b | 3a | 3b | 4a | 5a | 11 | 6a | |
| 1a | 75.5 | 77.2 | 86.3 | 83.3 | 55.1 | 49 | 66.7 | 70.6 | 58.6 | 67.6 | 72.5 | 53.9 |
| 1b-1 | 74.3 | 80.4 | 76.5 | 48 | 51 | 69.6 | 68.6 | 55.6 | 59.8 | 68 | 50.5 | |
| 1b-2 | 86.1 | 77.2 | 48 | 49 | 66.3 | 68.3 | 53.3 | 63.4 | 70.3 | 50.5 | ||
| 1b-3 | 86.3 | 55.1 | 55.1 | 71.6 | 73.5 | 61.6 | 68.6 | 72.5 | 51 | |||
| 1c | 57.1 | 57.1 | 70.6 | 73.5 | 60.6 | 69.6 | 73.5 | 51 | ||||
| 2a | 70.4 | 52 | 50 | 50 | 48 | 49 | 42.9 | |||||
| 2b | 53.1 | 50 | 45.9 | 48 | 41.8 | 41.8 | ||||||
| 3a | 87.3 | 53.5 | 65.7 | 75.5 | 52.9 | |||||||
| 3b | 50.5 | 66.7 | 87.3 | 52 | ||||||||
| 4a | 48.5 | 50.5 | 40.4 | |||||||||
| 5a | 48.5 | 46.1 | ||||||||||
| 11 | 46.1 | |||||||||||