Table 3.
Frequent patterns corresponding to catalytic residues
S1 | |
His | S1-0 S2-0 CN-2 ASP0-Q2 ACID0-Q2 ALA0-Q1 ALI0-Q1 ALI0-Q5 |
Asp | S1-0 S2-0 CN-3 ALI1-Q8 ALI0-Q8 ARO0-Q6 NEUTR0-Q3 SER0-Q3 BASIC0-Q7 HIS0-Q7 ALA0-Q8 |
Ser | S1-0 S2-0 CN-3 ALI0-Q8 NEUTR0-Q7 SER0-Q7 ACID0-Q5 GLY0-Q8 ALI0-Q4 SULFUR0-Q1 GLY0-Q1 CYS0-Q1 ASP0-Q5 ALA0-Q4 ALI0-Q1 |
S8 | |
His | CN-2 THR0-Q5 GLY0-Q4 HIS0-Q8 BASIC0-Q8 NEUTR0-Q1 NEUTR0-Q2 ALI0-Q4 NEUTR0-Q5 |
Asp | CN-3 GLY0-Q4 SER0-Q7 LEU0-Q8 GLY0-Q3 VAL0-Q5 ALI0-Q3 NEUTR0-Q7 ALI0-Q4 NEUTR0-Q4 ALI0-Q2 ALI0-Q1 ALI0-Q8 ALI0-Q5 |
Ser | S1-0 S2-0 LEU0-Q7 SER0-Q7 THR0-Q5 ALA0-Q6 GLY0-Q1 NEUTR0-Q7 ALA0-Q5 ALI0-Q7 NEUTR0-Q5 NEUTR0-Q8 ALI0-Q1 ALI0-Q6 ALI0-Q5 |
C1 | |
His | CN-3 ALI0-Q4 ALI0-Q8 ALI0-Q1 |
Asn | CN-2 S1-0 S2-0 TRP0-Q4 ARO0-Q2 SER0-Q8 GLY0-Q1 ARO0-Q4 BASIC0-Q6 ALI0-Q6 NEUTR0-Q8 ALI0-Q1 |
Cys | CN-3 S1-0 S2-0 ALA0-Q5 HIS0-Q3 PHE0-Q8 TRP0-Q4 BASIC0-Q3 SER0-Q5 GLN0-Q6 ARO0-Q8 ARO0-Q4 NEUTR0-Q5 GLY0-Q2 NEUTR0-Q6 ALI0-Q2 ALI0-Q4 ALI0-Q5 |
The dynamic features are indicated in boldface.