Table 1.
Gene | SNP | Position | refSNP | Swiss/German | Amish 1 | Amish 2 |
---|---|---|---|---|---|---|
ABCG5 | EXI | P9P | CC | CC | CC | |
EX2 | R50C | rs6756629 | CC | CC | CC | |
EX11 | V523I | AA | AA | AA | ||
EX13 | C600Y | GG | GG | GG | ||
EX13 | Q604E | rs6720173 | GG | GG | GG | |
EX13 | V622M | AA | AA | AA | ||
ABCG8 | 5′UTR | 41 | CC | CC | CC | |
5′UTR | 19 | rs11887534 | GG | GG | TTa | |
EX1 | P17P | CC | CC | CC | ||
EX1 | D19H | GG | GG | GG | ||
INT1 | 21 | CA | CA | CA | ||
INT1 | 7 | CT | CT | TTa | ||
EX2 | C54Y | rs4148211 | GG | GG | GG | |
EX6 | E238L | GG | GG | GG | ||
EX6 | A259V | CC | CC | CC | ||
EX7 | Q340E | GG | GG | GG | ||
EX8 | T400K | rs9282575 | CC | CC | CC | |
INT9 | 19 | CC | CC | CC | ||
INT10 | 50 | CC | CC | CC | ||
EX11 | A565A | rs4148217 | CC | CC | CTa | |
EX11 | G575R | GG | GG | GG | ||
EX13 | A632V | rs6544718 | CC | CC | CC |
The minor differences in one of the Amish-Mennonite proband.
Note the high degree of SNP conservation as well as homozygosity of the SNPs at the STSL locus.