Table 3.
Comparison of the whole-genome sequences of GNU-2353 and GNU-2377 from original P0 isolates and cell culture-passaged P1 and P5 strains.
| Strains | Coding regions | Nucleotides | Amino acids | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Positions | P0 | P1 | P5 | Positions | P0 | P1 | P5 | ||
| GNU-2353 | nsp2 | 2872 | C | T | T | 958 | L | F | F |
| 3070 | G | A | A | 1024 | V | I | I | ||
| 3111 | C | T | T | 1037 | –a | – | – | ||
| nsp3 | 366 | G | A | A | 122 | – | – | – | |
| 495 | C | T | T | 165 | – | – | – | ||
| nsp4 | 63 | C | T | T | 21 | – | – | – | |
| 73 | G | A | A | 25 | V | M | M | ||
| 183 | A | G | G | 61 | – | – | – | ||
| 310 | G | A | A | 104 | V | I | I | ||
| 317 | A | G | G | 106 | K | R | R | ||
| 411 | C | T | T | 137 | – | – | – | ||
| nsp11 | 469 | A | A | G | 157 | R | R | G | |
| GP2 | 251 | C | C | T | 84 | T | T | M | |
| 636 | C | C | T | 212 | – | – | – | ||
| GP3 | 13 | C | C | T | 5 | R | R | C | |
|
| |||||||||
| GNU-2377 | nsp2 | 1949 | C | C | T | 650 | P | P | L |
| 2019 | A | A | G | 673 | – | – | – | ||
| 2069 | A | A | G | 690 | N | N | S | ||
| 2323 | T | A | A | 775 | S | T | T | ||
| 2664 | A | G | G | 888 | – | – | – | ||
| 2679 | C | T | T | 893 | – | – | – | ||
| 2763 | G | A | A | 921 | – | – | – | ||
| 2935 | T | T | C | 979 | – | – | – | ||
| 3033 | C | T | T | 1011 | – | – | – | ||
| 3057 | C | T | T | 1019 | – | – | – | ||
| nsp3 | 318 | A | T | T | 106 | L | F | F | |
| nsp4 | 585 | T | T | C | 195 | – | – | – | |
| 588 | G | G | A | 196 | – | – | – | ||
| 597 | C | C | A | 199 | – | – | – | ||
aNo amino acid change found.