Table III.
Statistically enriched motifs from VP1/ABA-activated genes
Coregulated Class | Motifs (P < 10−5) | Genes with the Motif |
---|---|---|
ABA regulated (ABR) | ACGT-core ABRE | 84% |
GTGTC | 45% | |
ABA dependent (ABD) | ACGT-core ABRE | 71% |
CGTGT | 69% | |
TGTCG | 34% | |
VP1 dependent (VPD) | ACGT-core ABRE | 77% |
GTGTC | 62% | |
VP1 and ABA dependent (VAA) | ACGT-core ABRE | 77% |
CATGCA (Sph) | 40% | |
GTGTC | 67% | |
VP1 or ABA dependent (VOA) | ACGT-core ABRE | 68% |
TCGGC | 41% |