Table 2.

Clean reads quality metrics

Sample	Total raw reads (M)	Total clean reads (M)	Total clean bases (Gb)	Clean Reads Q20 (%)	Clean reads Q30 (%)	Clean reads ratio (%)
1_MaleA	67.73	66.79	6.68	98.37	92.58	98.61
2_FemaleA	67.73	66.77	6.68	98.36	92.51	98.59
32_FemaleA	67.73	67.11	6.71	98.42	92.71	99.09
36_MaleA	67.73	66.79	6.68	98.42	92.7	98.62
422_FemaleA	67.73	67.01	6.7	98.44	92.71	98.94
423_HermaphroditeA	67.73	66.99	6.7	98.36	92.48	98.91
431_MaleA	67.73	66.83	6.68	98.4	92.62	98.68
7_MaleA	67.73	66.94	6.69	98.37	92.45	98.84
9_FemaleA	67.73	66.97	6.7	98.38	92.49	98.88