TABLE 5.
Melting peak temperatures of the stx2 LightCycler hybridization probes for 117 STEC strains whose stx2 genes were previously characterized by block cycler PCR and PCR-RFLP
stx2 gene(s) present | No. of strains | Melting temp. (°C) | Serotype(s)a |
---|---|---|---|
stx2 | 27 | 71 | O6:NM (1), O26:H11/NM (7), O103:H2 (1), O111:NM (3), O145:NM (1), O157:H7/NM (13), Ound:NM (1) |
stx2c | 18 | 71 | O23:NM (1), O30:NM (1), O77:NM (1), O92:NM (1), O120:NM (1), O145:NM (2), O157:H7/NM (10), Orou:NM (1) |
stx2 and stx2c | 6 | 71 | O157:H7 (6) |
stx2d | 39 | 55 | O8:NM (1), O16:H32/H48 (2), O40:H6/NM (2), O62:NM (1), O70:NM (1), O75:H21 (1), O91:NM (1), O96:NM (1), O103:NM (1), O113:NM (2), O128:H2/NM (8), O140:NM (1), O146:NM (1), O162:NM (1), Orou:H19/NM (4), Ound:H8 (4), Ound:NM (7) |
1b | 51 | O22:H8 (1) | |
stx2e | 15 | 66 | O2:H5 (1), O8:Hund (1), O60:NM (2), O60:H2/NM (4), O101:H9 (1), Ound:NM (6) |
1c | 63 | Ound:NM (1) | |
stx2f | 10 | No melting | O15:NM (1), O26:NM (1), O66:NM (1), O83:H19 (1), O128:NM (3), O135:NM (1), Ound:NM (1), Ound:NM (1) |
Total | 117 |
Ound and Hund, O and H antigen, respectively, not determined with available typing sera; Orou, O antigen not determined because of incomplete or rough lipopolysaccharide; NM, nonmotile. Numbers in parentheses indicate number of strains with that serotype.
Nucleotide sequence variant of stx2d.
Nucleotide sequence variant of stx2e.