Table 2.
Multitrait meta-analysis between depression and risk factors in East Asians
| Risk Factors | SNP | CHR | BP | A1 | A2 | Trait1 | Trait2 | MTAG | Genes | Annotation | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Beta | P Value | Beta | P Value | Beta | P Value | ||||||||
| BMI | rs13029479 | 2 | 655222 | A | G | 0.101 | 0.007 | −0.052 | 5.40E-17 | 0.035 | 1.31E-09 | TMEM18 | New |
| rs4802269 | 19 | 46167469 | G | A | −0.07 | 4.94E-04 | 0.042 | 4.60E-16 | −0.021 | 5.01E-11 | GIPR | New | |
| Weight | rs4802269 | 19 | 46167469 | G | A | −0.07 | 4.94E-04 | 0.037 | 4.30E-17 | −0.021 | 1.25E-08 | GIPR | New |
| HDL | rs11066015 | 12 | 112168009 | A | G | −0.073 | 0.001 | −0.122 | 1.60E-109 | −0.033 | 8.23E-21 | ALDH2 | New |
| rs35626903 | 16 | 56431613 | G | A | −0.071 | 6.24E-06 | −0.028 | 2.50E-09 | −0.018 | 2.52E-09 | AMFR | New | |
| TBL | rs12993249 | 2 | 234479377 | A | G | −0.055 | 1.40E-03 | −0.123 | 1.60E-208 | −0.044 | 2.55E-46 | USP40 | New |
| rs10770745 | 12 | 20986617 | T | G | −0.067 | 8.73E-04 | −0.031 | 2.60E-13 | −0.018 | 9.50E-09 | SLCO1B3-SLCO1B7 | New | |
| rs11066015 | 12 | 112168009 | A | G | −0.073 | 1.47E-03 | −0.035 | 1.30E-15 | −0.02 | 4.66E-09 | ALDH2 | New | |
| Type 2 diabetes | rs10013800 | 4 | 71731236 | T | C | −0.092 | 4.21E-05 | 0.081 | 2.21E-10 | −0.023 | 1.19E-11 | GRSF1 | New |
| rs10974438 | 9 | 4291928 | A | C | 0.045 | 0.005 | 0.078 | 2.35E-16 | 0.017 | 4.95E-12 | GLIS3 | New | |
| rs11074451 | 16 | 20336257 | A | G | 0.1 | 2.27E-04 | 0.103 | 9.12E-11 | 0.026 | 5.61E-11 | GP2 | New | |
| Drugs used in diabetes use measurement | rs6850072 | 4 | 71725868 | A | G | 0.074 | 2.37E-04 | −0.086 | 1.14E-12 | 0.022 | 1.25E-11 | GRSF1 | New |
| rs10974438 | 9 | 4291928 | A | C | 0.045 | 0.005 | 0.072 | 1.91E-12 | 0.016 | 1.64E-09 | GLIS3 | New | |
| rs11074451 | 16 | 20336257 | A | G | 0.1 | 2.27E-04 | 0.114 | 2.00E-11 | 0.028 | 5.46E-11 | GP2 | New | |
| rs662872 | 18 | 8881068 | T | C | −0.084 | 1.80E-06 | 0.038 | 7.27E-04 | −0.016 | 2.02E-08 | MTCL1 | New | |
Note: The sections labeled “Trait 1” and “Trait 2” display the statistical results from the original GWAS for the traits involved in the MTAG analysis, MTAG section of the table presents the MTAG results specific to Trait 1. Trait1, depression; Trait2, risk factors.