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. 2024 Aug 27;51(3):684–695. doi: 10.1093/schbul/sbae145

Table 2.

Multitrait meta-analysis between depression and risk factors in East Asians

Risk Factors SNP CHR BP A1 A2 Trait1 Trait2 MTAG Genes Annotation
Beta P Value Beta P Value Beta P Value
BMI rs13029479 2 655222 A G 0.101 0.007 −0.052 5.40E-17 0.035 1.31E-09 TMEM18 New
rs4802269 19 46167469 G A −0.07 4.94E-04 0.042 4.60E-16 −0.021 5.01E-11 GIPR New
Weight rs4802269 19 46167469 G A −0.07 4.94E-04 0.037 4.30E-17 −0.021 1.25E-08 GIPR New
HDL rs11066015 12 112168009 A G −0.073 0.001 −0.122 1.60E-109 −0.033 8.23E-21 ALDH2 New
rs35626903 16 56431613 G A −0.071 6.24E-06 −0.028 2.50E-09 −0.018 2.52E-09 AMFR New
TBL rs12993249 2 234479377 A G −0.055 1.40E-03 −0.123 1.60E-208 −0.044 2.55E-46 USP40 New
rs10770745 12 20986617 T G −0.067 8.73E-04 −0.031 2.60E-13 −0.018 9.50E-09 SLCO1B3-SLCO1B7 New
rs11066015 12 112168009 A G −0.073 1.47E-03 −0.035 1.30E-15 −0.02 4.66E-09 ALDH2 New
Type 2 diabetes rs10013800 4 71731236 T C −0.092 4.21E-05 0.081 2.21E-10 −0.023 1.19E-11 GRSF1 New
rs10974438 9 4291928 A C 0.045 0.005 0.078 2.35E-16 0.017 4.95E-12 GLIS3 New
rs11074451 16 20336257 A G 0.1 2.27E-04 0.103 9.12E-11 0.026 5.61E-11 GP2 New
Drugs used in diabetes use measurement rs6850072 4 71725868 A G 0.074 2.37E-04 −0.086 1.14E-12 0.022 1.25E-11 GRSF1 New
rs10974438 9 4291928 A C 0.045 0.005 0.072 1.91E-12 0.016 1.64E-09 GLIS3 New
rs11074451 16 20336257 A G 0.1 2.27E-04 0.114 2.00E-11 0.028 5.46E-11 GP2 New
rs662872 18 8881068 T C −0.084 1.80E-06 0.038 7.27E-04 −0.016 2.02E-08 MTCL1 New

Note: The sections labeled “Trait 1” and “Trait 2” display the statistical results from the original GWAS for the traits involved in the MTAG analysis, MTAG section of the table presents the MTAG results specific to Trait 1. Trait1, depression; Trait2, risk factors.