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. 2002 Aug;40(8):2779–2785. doi: 10.1128/JCM.40.8.2779-2785.2002

TABLE 2.

gyrB gene sequence similarity and divergencea of each pair for E. coli, Salmonella, Shigella, Enterobacter, Klebsiella, and Yersinia calculated by DNASTAR

Strain no. Strain name % Similarity with strain no.
1 2 3 4 5 6 7 8 9 10 11 12 13 14
1 E. coli ATCC25922 91.3 91.0 91.0 91.1 90.9 98.0 97.8 98.1 89.2 89.2 89.2 89.3 80.4
2 S. enterica serovar Enteritidis P1 9.2 98.2 98.1 97.9 98.0 91.4 91.1 91.2 89.7 89.1 89.5 90.4 79.4
3 S. enterica serovar Paratyphi A P 1 9.5 1.8 98.5 97.9 98.0 90.9 90.7 90.9 89.8 88.9 89.6 90.2 79.2
4 S. enterica serovar Paratyphi B ATCC 8759 9.5 1.9 1.5 98.9 99.2 90.9 91.1 90.9 90.3 89.1 89.7 90.6 79.3
5 S. enterica serovar Typhi P1 9.4 2.2 2.1 1.1 99.0 90.7 90.9 90.7 90.2 88.8 89.7 90.7 79.8
6 S. enterica serovar Typhimurium ATCC 14028 9.6 2.0 1.9 0.8 1.0 90.9 91.1 90.9 90.3 89.5 89.5 90.8 79.7
7 S. boydii P1 2.0 9.1 9.6 9.6 9.9 9.7 98.7 99.1 89.5 89.2 89.0 89.1 80.4
8 S. flexneri ATCC 12022 2.3 9.5 10.0 9.5 9.7 9.5 1.3 98.4 89.5 89.2 89.3 89.0 80.8
9 S. sonnei ATCC 11060 1.9 9.4 9.6 9.6 9.9 9.7 0.9 1.6 89.5 89.4 88.9 89.2 80.5
10 E. aerogenes ATCC 13048 11.7 11.1 10.8 10.4 10.4 10.3 11.4 11.3 11.4 88.3 91.3 93.4 79.2
11 E. cloacae ATCC 13047T 11.4 11.9 12.0 11.9 12.2 11.4 11.4 11.5 11.2 12.7 87.8 87.6 80.0
12 K. oxytoca P1 11.4 11.2 11.0 11.0 11.0 11.2 11.6 11.3 11.6 9.3 13.3 89.7 79.5
13 K. pneumoniae P1 11.6 10.4 10.5 10.1 10.0 9.9 11.9 11.8 11.7 6.8 13.5 11.2 79.0
14 Y. enterocolitica ATCC 23715 21.2 22.9 23.3 23.3 22.4 22.5 21.6 21.1 21.3 23.3 22.1 22.7 23.7
a

Percent divergence is calculated by comparing sequence pairs in relation to the phylogeny reconstructed by MegAlign (DNASTAR). Percent similarity compares sequences directly without accounting for phylogenetic relationships.