TABLE 2.
Strain no. | Strain name | % Similarity with strain no.
|
|||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | ||
1 | E. coli ATCC25922 | 91.3 | 91.0 | 91.0 | 91.1 | 90.9 | 98.0 | 97.8 | 98.1 | 89.2 | 89.2 | 89.2 | 89.3 | 80.4 | |
2 | S. enterica serovar Enteritidis P1 | 9.2 | 98.2 | 98.1 | 97.9 | 98.0 | 91.4 | 91.1 | 91.2 | 89.7 | 89.1 | 89.5 | 90.4 | 79.4 | |
3 | S. enterica serovar Paratyphi A P 1 | 9.5 | 1.8 | 98.5 | 97.9 | 98.0 | 90.9 | 90.7 | 90.9 | 89.8 | 88.9 | 89.6 | 90.2 | 79.2 | |
4 | S. enterica serovar Paratyphi B ATCC 8759 | 9.5 | 1.9 | 1.5 | 98.9 | 99.2 | 90.9 | 91.1 | 90.9 | 90.3 | 89.1 | 89.7 | 90.6 | 79.3 | |
5 | S. enterica serovar Typhi P1 | 9.4 | 2.2 | 2.1 | 1.1 | 99.0 | 90.7 | 90.9 | 90.7 | 90.2 | 88.8 | 89.7 | 90.7 | 79.8 | |
6 | S. enterica serovar Typhimurium ATCC 14028 | 9.6 | 2.0 | 1.9 | 0.8 | 1.0 | 90.9 | 91.1 | 90.9 | 90.3 | 89.5 | 89.5 | 90.8 | 79.7 | |
7 | S. boydii P1 | 2.0 | 9.1 | 9.6 | 9.6 | 9.9 | 9.7 | 98.7 | 99.1 | 89.5 | 89.2 | 89.0 | 89.1 | 80.4 | |
8 | S. flexneri ATCC 12022 | 2.3 | 9.5 | 10.0 | 9.5 | 9.7 | 9.5 | 1.3 | 98.4 | 89.5 | 89.2 | 89.3 | 89.0 | 80.8 | |
9 | S. sonnei ATCC 11060 | 1.9 | 9.4 | 9.6 | 9.6 | 9.9 | 9.7 | 0.9 | 1.6 | 89.5 | 89.4 | 88.9 | 89.2 | 80.5 | |
10 | E. aerogenes ATCC 13048 | 11.7 | 11.1 | 10.8 | 10.4 | 10.4 | 10.3 | 11.4 | 11.3 | 11.4 | 88.3 | 91.3 | 93.4 | 79.2 | |
11 | E. cloacae ATCC 13047T | 11.4 | 11.9 | 12.0 | 11.9 | 12.2 | 11.4 | 11.4 | 11.5 | 11.2 | 12.7 | 87.8 | 87.6 | 80.0 | |
12 | K. oxytoca P1 | 11.4 | 11.2 | 11.0 | 11.0 | 11.0 | 11.2 | 11.6 | 11.3 | 11.6 | 9.3 | 13.3 | 89.7 | 79.5 | |
13 | K. pneumoniae P1 | 11.6 | 10.4 | 10.5 | 10.1 | 10.0 | 9.9 | 11.9 | 11.8 | 11.7 | 6.8 | 13.5 | 11.2 | 79.0 | |
14 | Y. enterocolitica ATCC 23715 | 21.2 | 22.9 | 23.3 | 23.3 | 22.4 | 22.5 | 21.6 | 21.1 | 21.3 | 23.3 | 22.1 | 22.7 | 23.7 |
Percent divergence is calculated by comparing sequence pairs in relation to the phylogeny reconstructed by MegAlign (DNASTAR). Percent similarity compares sequences directly without accounting for phylogenetic relationships.