TABLE 3.
Sequence comparison of the structural genes hoxFUYH and the deduced amino acid sequences, of the cyanobacteria A. variabilis ATCC 29413, A. variabilis IAM M58, Anabaena strain PCC 7120, Synechococcus strain PCC 6301, and Synechocystis strain PCC 6803
| Strain | Gene or protein | Sequence comparisona with: |
|||
|---|---|---|---|---|---|
| A. variabilis IAM M58 | Anabaena strain PCC 7120 | Synechococcus strain PCC 6301 | Synechocystis strain PCC 6803 | ||
| A. variabilis ATCC 29413 | hoxFUYH | 78/82/76/—b | 93/94/91/94 | 63/62/60/63 | 65/64/67/67 |
| HoxFUYH | 82 (87)/88 (95)/78 (83)/— | 95 (96)/98 (99)/95 (96)/97 (98) | 62 (73)/63 (73)/60 (75)/64 (74) | 65 (76)/62 (75)/63 (77)/68 (77) | |
| A. variabilis IAM M58 | hoxFUYH | 79/82/76/— | 66/63/64/— | 67/66/65/— | |
| HoxFUYH | 81 (87)/89 (95)/80 (89)/— | 61 (72)/58 (71)/60 (75)/— | 67 (76)/61 (74)/62 (78)/— | ||
| Anabaena strain PCC 7120 | hoxFUYH | 63/77/63/63 | 66/65/67/66 | ||
| HoxFUYH | 60 (71)/61 (72)/60 (74)/65 (74) | 65 (76)/62 (75)/62 (76)/68 (77) | |||
| Synechococcus strain PCC 6301 | hoxFUYH | 64/66/63/66 | |||
| HoxFUYH | 59 (71)/70 (80)/62 (80)/71 (79) | ||||
a
Nucleotide identity (%) and amino acid identity (similarity) (%) are given for hoxF, hoxU, hoxY, and hoxH (and their proteins) separately.
b
—, not sequenced in A. variabilis IAM M58.