Table 3.
List of sequences from the partial mitochondrial (subunit I of cytochrome c oxidase or cox1) and ribosomal genes (18S and 28S rDNA) included in the phylogenetic analyses
| Copepoda | Host species | Locality | Cox | 18S | 28S | Reference |
|---|---|---|---|---|---|---|
| Outgroup | ||||||
| Lernaeidae | ||||||
| Lamproglena clariae Fryer, 1956 | Clarias gariepinus (Burchell, 1822) | Kenya |
OR232208 OR232209 |
– | – | Rindoria et al. (2023) |
| Lamproglena cleopatra Humes, 1957 | Labeo victorianus Boulenger, 1901 | Kenya | OR232207 | – | – | Rindoria et al. (2023) |
| Lamproglena orientalis Markevich, 1936 |
Squaliobarbus curriculus (Richardson, 1846) Chanodichthys erythropterus (Basilewsky, 1855) |
China | – | DQ107552 | DQ107541 | Song et al. (2008) |
| Lernaea cyprinacea Linnaeus, 1758 |
Hemiculter leucisculus (Basilewsky, 1855) Opsariichthys bidens Günther, 1873 |
China | – | DQ107554 | DQ107548 | Song et al. (2008) |
| Ingroup | ||||||
| Chondracanthidae | ||||||
| Acanthochondria spirigera Shiino, 1955 | – | South Korea | KR049020 | KR048753 | KR048824 | Unpublished |
| Chondracanthus distortus Wilson, 1922 | – | South Korea | KR049023 | KR048756 | KR048827 | Unpublished |
| Clausidiidae | ||||||
| Conchyliurus quintus Tanaka, 1961 | – | South Korea China |
OQ725275 | KR048763 | KR048839 | Unpublished |
| Hemicyclops tanakai Itoh and Nishida, 2002 | – | South Korea | KR049027 | KR048769 | KR048854 | Unpublished |
| Lichomolgidae | ||||||
| Herrmannella hoonsooi Kim, 1992 | – | South Korea | KR049039 | – | KR048849 | Unpublished |
| Herrmannella longicaudata Avdeev, 1975 | – | South Korea | – | KR048757 | – | Unpublished |
| Lichomolgus nakaii Matsuzaki and Ogawa, 1989 | – | South Korea | – | – | KR048845 | Unpublished |
| Lichomolgus similis Ho and Kim, 1991 | – | South Korea China |
OQ725276 | KR048758 | – | Unpublished |
| Myicolidae | ||||||
| Ostrincola koe Tanaka, 1961 | – | South Korea | OQ725292 | KR048750 | KR048821 | Unpublished |
| Pseudomyicola spinosus (Raffaele and Monticelli, 1885) | – | South Korea China |
OQ725301 | KR048751 | KR048822 | Unpublished |
| Mytilicolidae | ||||||
| Mytilicola orientalis Mori, 1935 | Magallana gigas (Thunberg, 1793) | Germany China |
OQ725290 | HM775190 | – | Elsner et al. (2011) |
| Trochicola enterica Dollfus, 1914 | Calliostoma zizyphinum (Linnaeus, 1758) | France | – | AY627006 | – | Huys et al. (2006) |
| Trochicola japonica Shimura and Kuwabara, 1984 | – | China | OQ725305 | – | – | Unpublished |
| Rhynchomolgidae | ||||||
| Critomolgus vicinus Kim, 1996 | – | South Korea | KR048766 | KR048848 | Unpublished | |
| Zamolgus cavernularius Kim, 2000 | – | South Korea | KR048761 | KR048832 | Unpublished | |
| Schminkepinellidae | ||||||
| Cyclopinella sp. | – | Pacific Ocean | MK370282 | MK370225 | – | Khodami et al. (2019) |
| Schminkepinella sp. | – | Pacific Ocean | MK370288 | MK370222 | MK370276 | Khodami et al. (2019) |
| Taeniacanthidae | ||||||
| Clavisodalis dilatatus Dojiri and Humes, 1982 | – | Japan | – | – | LC752235 | Unpublished |
| Clavisodalis sentifer Dojiri and Humes, 1982 | – | Japan | – | LC752238 | LC752237 | Unpublished |
| Pseudotaeniacanthus congeri Yamaguti and Yamasu, 1959 | – | South Korea | KR049030 | – | – | Unpublished |
| Taeniacanthus yamagutii (Shiino, 1957) | – | South Korea | KR049032 | KR048748 | – | Unpublished |
| Ergasilidae | ||||||
| Acusicola margulisae Santacruz et al., 2020 |
Amphilophus citrinellus (Günther, 1864) Parachromis managuensis (Günther, 1867) Oreochromis sp. Poecilia mexicana Steindachner, 1863 |
Nicaragua |
MN854869 MN854870 |
MN852696 |
MN852849 MN852851 |
Santacruz et al. (2020) |
| Acusicola sp. | – | Iraq | LC599903 | – | – | Unpublished |
| Ergasilus anchoratus Markevich, 1946 | Tachysurus fulvidraco (Richardson, 1846) | China | – |
DQ107564 MZ558064 OP076959 |
DQ107528 | Song et al. (2008) |
| Ergasilus briani Markevich, 1933 | Misgurnus anguillicaudatus (Cantor, 1842) | China | – | DQ107572 | DQ107532 | Song et al. (2008) |
| Ergasilus caparti Míč et al., 2023 | Neolamprologus brichardi (Poll, 1974) | Burundi | – | OQ407469 | OQ407474 | Míč et al. (2023) |
| Ergasilus caeruleus Wilson, 1911 | – | USA |
OP830263 OP830265 |
– | – | Unpublished |
| Ergasilus centrarchidarum Wright, 1882 | – | USA |
OP830032 OP830192 OP830132 |
– | – | Unpublished |
| Ergasilus centrarchidarum Wright, 1882 | – | USA |
OP830234 OP830262 |
– | – | Unpublished |
| Ergasilus danjiangensis Song et al., 2008 | Zacco platypus (Temminck and Schlegel, 1846) | China | – | – | DQ107533 | Song et al. (2008) |
| Ergasilus hypomesi Yamaguti, 1936 | Acanthogobius hasta (Temminck and Schlegel, 1845) | China | – | DQ107573 | DQ107539 | Song et al. (2008) |
| Ergasilus jaraquensis Thatcher and Robertson, 1982 | – | Brazil |
MF651988 MF651989 |
– | – | Unpublished |
| Ergasilus luciopercarum Henderson, 1926 | – | USA |
OP830298 OP830347 |
– | – | Unpublished |
| Ergasilus macrodactylus (Sars, 1909) | Gnathochromis permaxillaris (David, 1936) | Burundi | – | OQ407465 | OQ407470 | Míč et al. (2023) |
| Ergasilus megaceros Wilson, 1916 | – | USA |
OP830321 OP830295 |
– | – | Unpublished |
| Ergasilus megacheir (Sars, 1909) | Simochromis diagramma (Günther, 1894) | Burundi | – | OQ407466 | OQ407471 | Míč et al. (2023) |
| Ergasilus mirabilis Oldewage and van As, 1987 | Clarias gariepinus (Burchell, 1822) | South Africa Zambia |
OR448769 OR448770 |
OR449753 | OR449756 | Fikiye et al. (2023) |
| Ergasilus parasarsi Míč et al., 2023 | Simochromis diagramma (Günther, 1894) | Burundi | – | OQ407467 | OQ407473 | Míč et al. (2023) |
| Ergasilus parasiluri (Yamaguti, 1936) |
Silurus asotus Linnaeus, 1758 Tachysurus fulvidraco (Richardson, 1846) |
China | – | DQ107567 | DQ107536 | Song et al. (2008) |
| Ergasilus parvitergum Ho et al., 1992 | – | USA | OP871074 | – | – | Unpublished |
| Ergasilus parvus Míč et al., 2023 | Spathodus erythrodon Boulenger, 1900 | Burundi | – | OQ407468 | OQ407472 | Míč et al. (2023) |
| Ergasilus peregrinus Heller, 1865 | Siniperca chuatsi (Basilewsky, 1855) | China | – | DQ107577 | DQ107531 | Song et al. (2008) |
| Ergasilus scalaris Markevich, 1940 | Tachysurus dumerili (Bleeker, 1864) | China | DQ107565 | DQ107538 | Song et al. (2008) | |
| Ergasilus sieboldi Nordmann, 1832 |
Perca fluviatilis Linnaeus, 1758 Sparus aurata Linnaeus, 1758 |
Czech Republic Egypt |
– | MW810238 |
OM812074 ON706996 |
Kvach et al. (2021) Abou-Okada et al. (2023) |
| Ergasilus tumidus Markevich, 1940 | Acheilognathus taenianalis (Günther, 1873) | China | – | DQ107569 | DQ107535 | Song et al. (2008) |
| Ergasilus versicolor Wilson, 1911 | – | USA |
OP830223 OP830335 |
– | – | Unpublished |
| Ergasilus wilsoni Markevich, 1933 | – | South Korea | KR049036 | KR048765 | KR048843 | Unpublished |
| Ergasilus yaluzangbus Kuang and Qian, 1985 | Oxygymnocypris stewartii (Lloyd, 1908) | China | – | DQ107578 | DQ107540 | Song et al. (2008) |
| Ergasilus yandemontei Waicheim et al., 2021 | Odontesthes hatcheri (Eigenmann, 1909) | Argentina | – | MT969345 | – | Waicheim et al. (2021) |
| Ergasilus sp. | Mugil liza Valenciennes, 1836 | South Korea Chile |
KR049035 KU557411 KU557412 |
– | KR048842 | Castro-Romero et al. (2016) |
| Ergasilidae gen. sp. | – | Mexico Nicaragua |
MG448691 MG448706 OM541914 |
– | – | Elías-Gutiérrez et al. (2018) Santacruz et al. (2022) |
| Gamispatulus schizodontis Thatcher and Boeger, 1984 | Serrasalmus maculatus Kner, 1858 | Brazil | PQ442941 PQ442938 PQ442940 PQ450081 | PQ452576 PQ452577 | PQ452579 | Present study |
| Gamispinus diabolicus Thatcher and Boeger, 1984 | – | Brazil |
MF651982 MF651983 |
– | – | Unpublished |
| Miracetyma sp. | – | Brazil |
MF651987 MF651985 |
– | – | Unpublished |
| Neoergasilus japonicus (Harada, 1930) |
Lepomis gibbosus (Linnaeus, 1758) Scardinius erythrophthalmus (Linnaeus, 1758) |
South Korea Czech Republic USA |
MZ964938 OP830068 |
KR048752 MH167970 |
KR048823 MW810241 |
Ondračková et al. (2019) Kvach et al. (2021) Vasquez et al. (2022) |
| Neoergasilus sp. | – | USA |
MZ964932 MZ964933 |
– | – | Vasquez et al. (2022) |
| Paeonodes subviridis El-Rashidy and Boxshall, 2001 | – | India | OP425700 | – | – | Unpublished |
| Paraergasilus brevidigitus Yin, 1954 | Cyprinus carpio Linnaeus, 1758 | China | – | DQ107576 | DQ107530_ | Song et al. (2008) |
| Paraergasilus longidigitus Yin, 1954 |
Abramis brama (Linnaeus, 1758) Perca fluviatilis Linnaeus, 1758 Scardinius erythrophthalmus (Linnaeus, 1758) |
Czech Republic | – | MW810239 | – | Kvach et al. (2021) |
| Paraergasilus medius Yin, 1956 | Ctenopharyngodon idella (Valenciennes, 1844) | China | – | DQ107574 | DQ107529 | Song et al. (2008) |
| Rhinergasilus piranhus Boeger and Thatcher, 1988 |
Astyanax lacustris (Lütken, 1875) Psalidodon bockmanni (Vari and Castro, 2007) |
Brazil | PQ442939 | – | PQ452578 PQ452580 PQ452581 PQ452582 | Present study |
| Sinergasilus major (Markevich, 1940) |
Ctenopharyngodon idella (Valenciennes, 1844) Silurus glanis Linnaeus, 1758 |
China Hungary |
– |
DQ107558 MZ047814 |
DQ107524 MZ047815 |
Song et al. (2008) Dos Santos et al. (2021) |
| Sinergasilus polycolpus (Markevich, 1940) | Hypophthalmichthys molitrix (Valenciennes, 1844) | China | – | DQ107563 | DQ107525 | Song et al. (2008) |
| Sinergasilus undulatus (Markevich, 1940) | Cyprinus carpio Linnaeus, 1758 | China | – |
DQ107561 MZ575163 |
DQ107527 | Song et al. (2008) |
| Therodamas longicollum Oliveira et al., 2021 | Leporinus fasciatus (Bloch, 1794) | Brazil | – | MW652731 | – | Oliveira et al. (2021) |
Taxa represented in bold fonts are the novel sequences provided in the present study.