Table 1.
Summary table of viruses of the subfamily Alphaherpervirinae
| Scientific name | Common name | Abbv | Acc. Number (ICTV) | Reference Acc. Number | Host | Complete genomes | Sequencing technology for ref. genome | |
|---|---|---|---|---|---|---|---|---|
| Simplexvirus | atelinealpha1 | Ateline alphaherpesvirus 1 | HVA1 | KY385637 | [45] | Primate | 1 | Sanger, Illumina |
| bovinealpha2 | Bovine alphaherpesvirus 2 | BMV | MT862163 | [46] | Cattle | 2 | Sanger, Illumina, ONT | |
| cercopithecinealpha2 | Cercopithecine alphaherpesvirus 2 | SA8 | AY714813 | [47] | Primate | 1 | Sanger | |
| humanalpha1 | Herpes simplex virus type 1 | HSV1 | JN555585 | [48] | Human | 71 | Illumina | |
| humanalpha2 | Herpes simplex virus type 2 | HSV2 | JN561323 | [48] | Human | 14 | Illumina | |
| leporidalpha4 | Leporid herpesvirus 4 | LHV4 | JQ596859 | [49] | Lepus | 1 | 454 | |
| macacinealpha1 | Macacine alphaherpesvirus 1 | BV | AF533768 | [50] | Primate | 18 | Sanger | |
| macacinealpha2 | Macacine alphaherpesvirus 2 | McAHV2 | KY628968 | [45] | Primate | 1 | Sanger, Illumina | |
| macacinealpha3 | Macacine alphaherpesvirus 3 | McAHV3 | KY628970 | [45] | Primate | 1 | Sanger, Illumina | |
| macropodidalpha1 | Macropodid alphaherpesvirus 1 | MaAHV1 | KT594769 | [51] | Marsupial | 1 | Illumina | |
| macropodidalpha2 | Macropodid alphaherpesvirus 2 | MaAHV2 | MT900475 | [52] | Marsupial | 1 | Illumina | |
| macropodidalpha4 | Macropodid alphaherpesvirus 4 | MaAHV4 | MT900474 | [52] | Marsupial | 1 | Illumina | |
| paninealpha3 | Panine alphaherpesvirus 3 | ChHV | JQ360576 | [53] | Primate | 1 | 454 | |
| papiinealpha2 | Herpesvirus papio 2 | HPV2 | DQ149153 | [54] | Primate | 6 | Sanger | |
| pteropodidalpha1 | Fruit bat alphaherpesvirus 1 | FBAHV1 | AB825953 | [55] | Bat | 1 | 454 | |
| pteropodidalpha2 | Bat alphaherpesvirus | PLAHV | LC492974 | [56] | Bat | 1 | Sanger, ONT | |
| saimiriinealpha1 | Herpesvirus saimiri 1 | HVS1 | HM625781 | [57] | Primate | 1 | Sanger, 454 | |
| Mardivirus | anatidalpha1 | Duck enteritis virus | DEV | JF999965 | [58] | Bird | 10 | 454 |
| columbidalpha1 | Pigeon herpesvirus | PHV | KX589235 | [59] | Bird | 2 | Sanger | |
| gallidalpha2 | Marek's disease virus | MDV | AF243438 | [60] | Bird | 65 | Sanger | |
| gallidalpha3 | Gallid herpesvirus 3 | GaAHV3 | HQ840738 | [61] | Bird | 2 | 454 | |
| meleagridalpha1 | Turkey herpesvirus | HVT | AF291866 | [62] | Bird | 1 | Sanger | |
| spheniscidalpha1 | Spheniscid alphaherpesvirus 1 | SpAHV1 | LT608135 | [63] | Bird | 2 | 454 | |
| Varicellovirus | bovinealpha1 | Infectious bovine rhinotracheitis virus | IBRV | JX898220 | [64] | Cattle | 50 | Sanger, Illumina |
| bovinealpha5 | Bovine encephalitis herpesvirus | BoAHV5 | AY261359 | [65] | Cattle | 4 | Sanger | |
| bubalinealpha1 | Water buffalo herpesvirus | BuAHV1 | KU936049 | [66] | Cattle | 1 | Illumina | |
| canidalpha1 | Canine herpesvirus | CHV | KT819633 | [67] | Dog | 11 | Illumina | |
| caprinealpha1 | Goat herpesvirus | CpAHV1 | MG989243 | [68] | Bovid | 1 | Illumina | |
| cercopithecinealpha9 | Simian varicella virus | SVV | AF275348 | [69] | Primate | 1 | Sanger | |
| cervidalpha1 | Cervid alphaherpesvirus 1 | CvAHV1 | MH036942 | Unpublished | Deer | 1 | Illumina | |
| cervidalpha2 | Cervid alphaherpesvirus 2 | CvAHV2 | MH036943 | Unpublished | Deer | 1 | Illumina | |
| cervidalpha3 | Cervid alphaherpesvirus 3 | CvAHV3 | MH036941 | Unpublished | Deer | 1 | Illumina | |
| equidalpha1 | Equine abortion virus | EAV | AY665713 | [70] | Horse | 28 | Sanger | |
| equidalpha3 | Equine coital exanthema virus | EqAHV3 | KM051845 | [71] | Horse | 1 | 454, Illumina | |
| equidalpha4 | Equine rhinopneumonitis virus | EqAHV4 | AF030027 | [72] | Horse | 10 | Sanger | |
| equidalpha6 | Ulcerative stomatitis in donkeys | AsHV | MT012704 | [73] | Donkey | 1 | Illumina | |
| equidalpha8 | Asinine herpesvirus 3 | EqAHV8 | MF431611 | [74] | Horse | 6 | Illumina | |
| equidalpha9 | Equid alphaherpesvirus 9 | EqAHV9 | AP010838 | [75] | Giraffe | 1 | Sanger | |
| felidalpha1 | Feline viral rhinotracheitis virus | FVRV | FJ478159 | [76] | Feline | 37 | 454 | |
| humanalpha3 | Varicella-zoster virus | VZV | X04370 | [77] | Human | 21 | Sanger | |
| monodontidalpha1 | Beluga whale alphaherpesvirus 1 | MoAHV1 | MF678601 | [78] | Whale | 1 | Illumina | |
| phocidalpha1 | Phocid herpesvirus 1 | PhHV1 | MH509440 | [79] | Seal | 0 | - | |
| suidalpha1 | Pseudorabies virus | PRV | JF797218 | [80] | Swine | 51 | Illumina | |
| Iltovirus | cacatuidalpha2 | Cacatuid herpesvirus 2 | CaHV-2 | MK360902 | [81] | Bird | 1 | Illumina |
| gallidalpha1 | Infectious laryngotracheitis virus | ILTV | JN596962 | [82] | Bird | 65 | 454 | |
| psittacidalpha1 | Pacheco's disease virus | PDV | AY372243 | [83] | Bird | 1 | Sanger | |
| psittacidalpha5 | Psittacid alphaherpesvirus 5 | PsHV-5 | MK955929 | [84] | Bird | 2 | Illumina | |
| Scutavirus | chelonidalpha5 | Chelonid alphaherpesvirus 5 | ChHV5 | HQ878327 | [85] | Turtle | 0 | - |
| testudinidalpha3 | Testudinid herpesvirus 3 | TeHV3 | KM924292 | [86] | Turtle | 5 | Illumna |
This table contains the scientific and common names, abbreviations, accession numbers from ICTV, related articles, hosts, number of complete genomes available on NCBI and the sequencing technology used for the reference genome (according to the accession number and related articles) of viruses of the Alphaherpesvirinae subfamily