Skip to main content
PLOS Global Public Health logoLink to PLOS Global Public Health
. 2025 May 23;5(5):e0003983. doi: 10.1371/journal.pgph.0003983

End of treatment and 12-month post-treatment outcomes in patients treated with all-oral regimens for rifampicin-resistant tuberculosis in Ukraine: a prospective cohort study

Vini Fardhdiani 1,2, Olena Trush 1, Nataliia Lytvynenko 3, Svitlana Pylypchuk 3, Yana Terleeva 4, Khachatur Malakyan 5, Praharshinie Rupasinghe 6,7, Yves Wally 2, Marve Duka 1, Vitaly Stephanovich Didyk 8, Olga Valentinovna Siomak 8, Oleksandr Blyzniuk 8, Jennifer Furin 9, Dmytro Donchuk 10, Chinmay Laxmeshwar 1,11, Petros Isaakidis 10,12,*
Editor: N Sarita Shah13
PMCID: PMC12101767  PMID: 40408534

Abstract

The World Health Organization has called for operational research on all-oral shorter regimens for rifampin-resistant and multidrug-resistant forms of tuberculosis (RR/MDR-TB). We followed a cohort of patients in Zhytomyr, Ukraine for effectiveness, safety, tolerability and feasibility of bedaquiline & delamanid-based treatment regimens under programmatic conditions. This was a single-arm implementation study. All consenting persons with RR/MDR-TB were enrolled between 1 April 2019 and 31 May 2021 and followed up 12-months after treatment completion. We assessed quality of life and depression symptoms between start and end-of-treatment. We enrolled 300 patients. Overall, 212 (71%) patients were cured, 22 (7%) patients completed treatment, median time to culture conversion was 58 days (IQR:30–75), and 21% and 27% of patients had at least one serious or Grade 3/4 adverse event, respectively. The overall BREF-WHO/Quality of Life score improved between baseline and end-of-treatment, from average 52.64(std. dev:21.63) to 57.15(std. dev:21.43) while Patient Health Questionnaire-9(PHQ-9) score decreased from 6.67(std. dev:4.75) at baseline to 5.34(std. dev: 5.18) at end-of-treatment. Twelve months post-treatment 174/234(74%) were alive and recurrence-free, 17(7%) patients died, one (<1%) had recurrent TB, while 42 (18%) were lost from the post-treatment follow-up. All-oral short-term regimens showed high success under programmatic conditions in Ukraine, despite extreme implementation challenges during the COVID-pandemic and the Russia-Ukraine war. Moreover, this was a cohort of patients with high levels of co-morbidities and substance use. A multidisciplinary, psychosocial support model might have contributed to satisfactory treatment outcomes, improved quality of life and decreased symptoms of depression among people living with RR/MDR-TB.

Summary

We evaluated all-oral regimens for multidrug-resistant tuberculosis in Zhytomyr, Ukraine, achieving 78% success, despite high rates of co-infections and substance use. Seventy-four per-cent of patients remained relapse-free 12-months post-treatment, demonstrating feasibility under programmatic conditions during the COVID-19 pandemic and war.

Introduction

Rifampicin-resistant/multidrug-resistant forms of TB (RR/MDR-TB) are a major global health concern, with nearly half a million people affected in 2022 [1]. As a rule, RR/MDR-TB regimens are lengthy and involve multiple toxic second-line agents, resulting in a success rate of just over 60% among those receiving them [2]. Although the past decade has seen remarkable promise in the treatment of RR/MDR-TB with effective new and re-purposed drugs being used successfully, global experience with regimens containing these drugs remains limited [3].

In 2019, while awaiting the completion of several randomized controlled trials aimed at optimizing RR/MDR-TB treatment, the World Health Organization (WHO) called for structured operational research to be carried out by TB programs on the use of all-oral, shorter regimens [4]. The recommendation aimed to promote implementation science, improving access to newer agents—including bedaquiline, delamanid, and linezolid—while enabling the structured collection of data on the performance of all-oral regimens in real-world conditions, particularly in settings and populations often excluded from formal clinical trials [5] Such operational research could also afford the opportunity to collect data on other aspects of RR/MDR-TB care—including person-centered approaches—that might be relevant during programmatic scale-up of newer regimens [6].

From 2019 to 2022, MSF, along with the National TB Institute and the Ministry of Health in Ukraine, conducted operational research to demonstrate a person-centered model of ambulatory care along with the use of all-oral short-course regimens for RR-TB in Zhytomyr oblast. This study took place during an extremely challenging period marked by national health reform, followed by the COVID-19 pandemic, and the Russia-Ukraine war. Here, we present the treatment outcomes, including 12-month recurrence-free survival, safety, tolerability, and feasibility of using all-oral short-course regimen as part of a comprehensive person-centered model of care.

Methods

Study design

We conducted an uncontrolled, single-arm clinical and feasibility study in the Zhytomyr Oblast of Ukraine. Enrollment of RR/MDR-TB patients commenced on 1 April 2019 and concluded on 31 May 2021. The treatment duration ranged from 9 to 12 months. The participants were monitored until 12 months after the successful completion of the treatment.

Study setting

The study was conducted in the Zhytomyr oblast of Ukraine. In 2017, the city of Zhytomyr had a tuberculosis prevalence rate of 106.2 cases per 100,000 people, which was higher than the national average of 76.6 cases per 100,000 people. The oblast is served by a regional TB referral hospital located in Zhytomyr. This hospital also coordinated the ambulatory care for patients at outpatient facilities which included health posts, TB-units, ambulatory care facilities, family doctors, and polyclinics, and post-treatment follow-up. The health system for TB care in the oblast is presented elsewhere7.

RR-TB/MDR-TB treatment and monitoring protocol

Baseline assessments were conducted for all study participants at enrollment. These included bacteriological assessment (Xpert MTB/RIF® assay for all patients, if found RR by Xpert MTB/RIF® assay, Genotype MTBDRplus® MTBDRsl, culture and phenotypic DST), clinical assessment, laboratory assessment (for HIV, Hepatitis B, Hepatitis C, liver function test, renal function test, etc.), chest radiograph, and an electrocardiogram (ECG).

As per the national guidelines during the study period, all patients were hospitalized for the entire duration of their TB treatment. However, patients enrolled in this study were discharged to ambulatory care after achieving a smear-negative result. This approach contrasted with the national guidelines, which mandated prolonged hospitalizations. To ensure quality care during the ambulatory phase, the study team conducted an assessment of the outpatient facilities throughout the oblast and in close proximity with the patients’ residences and provided support to strengthen the care available at these sites [7].

All patients received a treatment regimen that lasted for a period ranging from 9 to 12 months. All clinical decisions were made by the oblast level RR-TB consilium based out of the regional TB hospital in Zhytomyr. Individuals lacking any evidence of fluoroquinolone resistance were administered bedaquiline (BDQ), linezolid (LZD), levofloxacin (LFX), clofazimine (CFZ), and cycloserine (CS). Individuals with evidence of fluoroquinolone resistance were administered bedaquiline (BDQ), linezolid (LZD), delamanid (DLM), clofazimine (CFZ), and cycloserine (CS).

The first follow-up assessment occurred two weeks following treatment initiation. This encompassed the evaluation for adverse events and included an ECG for all. Subsequently, monthly follow-ups were conducted until the completion of treatment. The following procedures were conducted: sputum analysis for smear and culture, evaluation of adverse events, laboratory testing, ECG, assessment of adherence, provision of adherence support, and counselling. If a patient had a positive culture at or after three months of treatment, both baseline and follow-up isolates were subjected to phenotypic DST for new and repurposed drugs, including MIC testing if resistance to any new or repurposed drugs was detected.

The BREF WHO Quality of Life BREF (WHOQoL-BREF) and Patient Health Questionnaire (PHQ) 9 questionnaires were administered at baseline and then at months 3, 6, 9, and 12. HIV viral load testing was conducted at months 6 and 12, and CD4 count was performed at month 12 for those who tested positive for HIV.

Post-treatment follow-up assessments were conducted until 12 months after the completion of treatment. A nurse contacted the patients via home visits or telephone calls, while during the COVID-19 pandemic and post-war, this communication was mainly telephonic. After three failed attempts to contact a patient within one month, we considered them as post-treatment lost to follow-up.

An important element of this study was providing extensive and multidisciplinary patient support beyond the national guidelines. This encompassed various activities, such as treatment literacy, intensive adherence support and monitoring, psychosocial support during both hospitalization and ambulatory care, and community involvement (Box 1). All patients with alcohol use disorder were provided care by a psychiatrist and psychologist to enable them to continue their treatment. The alcohol use disorder (AUD) care package and its results are presented elsewhere [8]. All study procedures were conducted as routine care for RR/MDR-TB treatment in Zhytomyr by the Ministry of Health (MOH) staff with support from MSF.

Box 1. Patient and community support for RR-TB patients in Zhytomyr Oblast, Ukraine, April 2019 - May 2021.

Activity Resources Expected Outcome
Patient support
Treatment literacy after diagnosis Dedicated staff (doctor or nurse) conducted a 20-minute session with the patient on the following topics: What is TB? How did I get this? How do I prevent others from getting it?
Three subsequent counseling sessions for patients after initiation of treatment (hospitalization, 1 st ,2 nd , 3 rd day) by nurse and social worker.
One session with the family members conducted by a nurse and social worker before discharge.
Patients understand that anyone can be infected, and that TB is curable.
Family members go for TB screening themselves.
Patients learn about the TB disease and its transmission, medicines used for treatment, possible side effects, monitoring schedule, importance of adherence, support available during treatment. Sessions help to reduce the level of self-stigmatization.
Family members understand the patient’s predicament and help reduce/eliminate stigma; support the patient morally and emotionally.
Treatment monitoring and adherence support Nurse (MoH1) with DOT2, alternative involvement of ambulatory care facilities, NGO3 (Let Your Heart Beat) along with a trusted family member of patient as the treatment buddy. VOT4 and SAT5 provided to patients who needed them.
Regular follow-up and medical check-ups
Patients receive medication on time and can adhere to the treatment regimen
Psychosocial support during hospitalization and ambulatory care Social worker conducted patients’ needs assessment; actions based on patients’ needs.
Provision of psychological support, if needed.
Budget for social needs: support to apply for public aid like unemployment benefits, transportation reimbursements to attend follow-ups, food and hygiene articles support, firewood support during winter.
Renewal of patients’ needs assessment if necessary (constantly during treatment)
Patients were psychologically supported throughout the treatment process.
Basic social needs are satisfied.
Patients have all necessary documents to apply for government funding and to be independent from other external support.
Assess AUD6, SUD7, depression Psychologist/nurse assessed/screened for mental health needs and AUD6
Provided support for linkage with public psychiatric services
Comprehensive management of patient’s medical condition improves quality of life and leads to successful TB treatment outcome
Community Support
Involving communities where patients originate from Trained health workers and social workers conduct awareness sessions with neighbors and friends. Reduction in stigmatizing behavior, additional support from the community to the patient

1MoH: Ministry of Health; 2DOT: Direct Observed Therapy; 3NGO: Non-Governmental Organisation; 4VOT: Video Observed Therapy; 5SAT: Self-Administered Therapy; 6AUD: Alcohol Use Disorder; 7SUD: Substance Use Disorder.

Adaptations to implementation during COVID-19.

The COVID-19 pandemic significantly restricted the interactions between mobile teams and patients undergoing ambulatory treatment. Consequently, all psychological counseling and support sessions were conducted via phone calls. Additionally, nurses incorporated infection control education into their sessions and distributed personal protective equipment (PPE). To minimize contact, only one mobile team member interacted directly with the patient while distributing social support packages. Despite these challenges, all services outlined in the treatment protocol were delivered timely. Upon discharge from the hospital, transportation for patients to their homes using taxis was provided. This measure aimed to prevent patients from exposure to potentially infected individuals in public transportation.

Adaptations to implementation post-war period.

The onset of the war had a detrimental impact on the ambulatory treatment of TB patients. Public transportation became inaccessible for many, and military checkpoints on roads made it extremely difficult or even impossible for patients to reach medical facilities. Additionally, the closure of stores led to a shortage of essential products and hygiene items for patients. During the war, we continued to provide continuous support through a multidisciplinary team comprising a nurse, social worker, and psychologist. The contents of the monthly food packages provided to patients were increased with an aim to cover 70% of their nutritional needs. The MSF mobile teams also facilitated the transportation of sputum samples to the laboratory and delivered medications to patients in the field.

Study population

All bacteriologically confirmed RR-TB patients diagnosed during the study period were included. We also enrolled persons with clinical and/or radiological evidence of possible TB, even in the absence of bacteriologic confirmation, if the person was a known household contact of a patient with documented RR/MDR-TB.

We included patients with QTcF ≤ 450msec (males) or ≤ 470msec (females), obtained within 14 days prior to the start of the study treatment. We excluded patients with known allergies or hypersensitivities to two or more drugs in the proposed treatment regimen.

Study variables and definitions

The 2013 WHO outcome definitions were used. Cure and treatment completion were categorized as successful outcomes, while treatment failure, death, and loss to follow-up were categorized as unsuccessful outcomes.

Culture conversion was defined as a participant who had a positive culture at baseline and had two consecutive negative cultures taken at least 14 days apart (+/− 7 days) with no intervening positive cultures. Time to culture conversion was defined as the time between treatment initiation and the time-point of the specimen collection of the first negative culture.

Adverse Events were graded on a scale of 1–4, with 1 being mild and 4 being life-threatening. The grading followed the National Institute of Allergy and Infectious Diseases (NIAID) Division of Microbiology and Infectious Diseases (DMID) grading system and a selection of relevant terms from the National Cancer Institute (NCI) Common Terminology Criteria for Adverse Events (CTCAE) [9,10]. Serious adverse events (SAE) were defined as any adverse event that resulted in either death, permanent/significant disability or incapacity, hospitalization or prolongation of hospitalization to manage the adverse event or was categorized as life-threatening. We used Hy’s criteria for liver dysfunction, which includes an ALT and AST of more than three times the upper limits of normal and a total bilirubin of more than two times the upper limit of normal and no other reason can be found to account for these elevations. A permanent change in the treatment regimen was defined as the decision by the consilium to stop one or more medications in the treatment regimen for more than 30 days.

Hazardous and harmful drinking was defined and measured using the Alcohol Use Disorders Identification Test (AUDIT) followed by evaluation by a psychologist and a psychiatrist [11]. Hazardous and harmful drinking was defined as AUDIT scores of 8–13 for females and 8–15 for males and >13 for females and >15 for males, respectively. For WHOQoL-BREF and PHQ-9 assessments, the baseline was defined as the first measurement within 30 days before or after treatment initiation. The end of treatment was defined as an assessment 30 days before or after the end of treatment.

Data collection and analysis

All patient information was collected using standardized study forms and encoded into EndTB Bahmni®. Descriptive analysis was carried out to describe the characteristics of the study population using proportions, means with standard deviation, or median with interquartile range. For the analysis of time to culture conversion, the outcome of interest was culture conversion achieved at six months of treatment (as a categorical variable). Log-binomial regression analysis was used to explore associations between selected demographic and clinical characteristics and unfavorable outcomes. We included variables with a p-value <0.2 in the initial multivariable model, as well as factors that made sense clinically, even if their p-value was slightly above 0.2. We then refined the model using backward elimination and stepwise selection. For the estimation of post-treatment recurrence, we assumed different scenarios about deaths, and we excluded patients with missing follow-up data [12]. First, we included patients who died but did not count them as recurrences, thereby assuming that patients who died did not experience recurrent TB. Second, we included patients who died and we counted them as recurrences, thereby assuming that patients who died experienced recurrent TB. Third, we excluded patients who died from the calculations. In all the scenarios, we treated missing FU as missing data and excluded these patients. WHOQoL-BREF scores were calculated as per the WHO instructions.

We used a paired t-test for the analysis of the WHOQOL-BREF data. Data were analyzed using STATA version 15 (StataCorp, College Station, TX, USA).

Ethics

Ethics approval was obtained by MSF Ethics Review Board and the Medical Ethics committee of “National Institute of Physiology and Pulmonology of the National Academy of Medical Sciences of Ukraine”. We sought written informed consent among persons ≥ 18 years or guardian consent and participant assent for persons ≥ 12 years of age or only guardian consent for < 12 years of age.

Results

Socio-demographic and clinical characteristics

From 1 April 2019–31 May 2021, 300 patients were enrolled in the study with a median age of 45 years (IQR 38–52 years). Table 1 shows the key characteristics of these patients. Among these, 233 (78%) were male, 69 (23%) were living with HIV, 6 (2%) had Hepatitis B, 60 (20%) with history or active Hepatitis C (HCV), 13 (4%) had diabetes mellitus, 204 (69%) smoked cigarettes, 14 (5%) persons who injected drugs (PWID), 68 (24%) had hazardous drinking, and 73 (25%) had alcohol dependence. Furthermore, 168 (56%) participants had previously been treated with first or second-line drugs (Table 1).

Table 1. Baseline socio-demographic characteristics, co-morbidities, substance use, TB treatment history, and DRTB drug resistance profile among RR-TB patients in Zhytomyr Oblast, Ukraine, April 2019 – May 2021.

Characteristics Total (n = 300)
n (%)
Socio-demographic characteristics
Sex (Male) 233 (78)
Age in years (Median [IQR]) 45 [38-52]
HIV+ 69 (23)
HBV+ 6 (2)
HCV+ (history or active) 60 (20)
Diabetes 13 (4)
Smoked cigarettes 204 (68)
Persons who inject drugs (PWID) 14 (5)
Hazardous drinking1 68 (24)
Alcohol dependence2 73 (25)
TB treatment history n = 300
No previous TB treatment 127 (42)
Previously treated with first line drug 93 (31)
Previously treated with second line drug 75 (25)
TB treatment history unclear/unknown 5 (2)
Sub-class drug resistance profile n = 269
Poly-resistance3 3 (1)
Mono-resistance 25 (9)
Confirmed MDR 85 (32)
pre-XDR4 156 (58)

1Hazardous drinking: (Female: Audit≥8–13; Male: Audit≥8–15) 2Harmful drinking: (Female: Audit>13; Male: Audit>15) 3Poly-resistance = one H(S) resistance and 2 HE(S) resistance. 4pre-XDR: following the 2020 definition of pre-XDR TB, resistance to R, H and either a fluoroquinolone or aminoglycoside.

End of treatment outcomes

Overall, 78% of patients had successful treatment outcomes. The mortality was 13%, with a median duration to death from treatment initiation of 2.1 months (IQR 0.4 – 4.3 months). The lowest treatment success was observed among PWIDs (64%) (Tables 2–3). There was no statistically significant difference among successful outcomes for those with AUD (p = 0.785), HCV+ (p = 0.430) or PLHIV (p = 0.539) compared to those with no comorbid conditions.

Table 2. End of treatment outcome by comorbidities among RR-TB patients in Zhytomyr Oblast, Ukraine.

Treatment outcome Total6
(n = 300)
HIV +
(n = 69)
Hep C1
(n = 60)
PWID2
(n = 14)
Hazardous drinking3 (n = 68) Alcohol dependence4 (n = 73) No comorbid/risk factor5 (n = 99)
n (%) n (%) n (%) n (%) n (%) n (%) n (%)
Cured 212 (71) 50 (72) 38 (63) 9 (64) 41 (60) 50 (69) 63 (64)
Completed 22 (7) 7 (10) 6 (10) 0 10 (15) 8 (11) 15 (15)
Died 40 (13) 8 (12) 10 (17) 4 (29) 10 (15) 9 (12) 11 (11)
Treatment failure 17 (6) 3 (5) 5 (8) 1 (7) 6 (9) 2 (3) 7 (7)
LTFU 9 (3) 1 (1) 1 (2) 0 1 (1) 4 (5) 3 (3)
Treatment success 234 (78) 57 (82) 44 (73) 9 (64) 51 (75) 58 (80) 78 (79)

1Hepatitis C active or history; 2PWID = People Who Inject Drugs; 3Hazardous drinking: Female: Audit≥8–13; Male: Audit≥8–15; 4Alcohol dependence: Female: Audit>13; Male: Audit>15; 5No comorbidities/risk factor = HIV negative, Hepatitis B non-reactive, no active or history of Hepatitis C, not PWID, and not hazardous drinker/alcohol dependence. 6Comorbidites are not mutually exclusive.

Table 3. End of treatment outcome by history of treatment and resistance profile among RR-TB patients in Zhytomyr Oblast, Ukraine.

Treatment outcome Previous treatment Drug resistance
Never treated/unclear history
(n = 132)
Prev. 1st line
(n = 93)
Prev. 2nd line
(n = 75)
Poly and mono resistance (n = 28) Confirmed MDR
(n = 85)
Pre-XDR
(n = 156)
n(%) n (%) n (%) n (%) n (%) n (%)
Cured 101 (76) 66 (71) 45 (60) 22 (79) 61 (72) 108 (69)
Completed 13 (10) 4 (4) 5 (6) 1 (3) 4 (5) 9 (6)
Died 11 (8) 15 (16) 14 (19) 2 (7) 13 (15) 24 (16)
Treatment failure 2 (<1) 6 (7) 9 (12) 2 (7) 4 (5) 10 (6)
LTFU 5 (<1) 2 (2) 2 (3) 1 (3) 3 (3) 5 (3)
Success rate 114 (86) 70 (75) 50 (66) 23 (82) 65 (76) 117 (75)

Patients who were previously treated with first-line drugs (75%, p = 0.033) or second-line drugs (66%, p < 0.001) had significantly lower successful treatment outcomes than those who were never treated for TB (86%) earlier.

12-month post-treatment outcomes

Among the 234 patients with successful treatment outcomes, 172 (74%) were recurrence-free at 12 months post-treatment. Seventeen patients (7%) died post-treatment with a median time to death of 7.9 months (IQR: 6.0 – 11.7 months) post-treatment. Cause of death was ascertained for all patients, and none were related to complications of TB disease or treatment.

One patient (<1%) experienced recurrent TB during the post-treatment follow-up (Table 4). Two additional patients, who were culture negative 12 months post treatment, were deemed to have recurrent TB by clinical diagnosis.

Table 4. Overall 12-month post treatment outcomes among RR-TB patients in Zhytomyr Oblast, Ukraine.

Treatment outcome Total (n = 234) Cured (n = 212) Completed (n = 22)
n (%) n (%) n (%)
Recurrence free and alive at 12 months post-treatment 174 (74) 161 (75) 13 (59)
Died post treatment 17 (7) 15 (7) 2 (9)
Relapse or recurrence 1 (<1) 1 (<1) 0 (0)
LTFU post treatment 42 (18) 35 (17) 7 (32)

The alternative estimates of post-treatment recurrence are presented in Table 5. The estimates for recurrence-free post-treatment survival at 12 months post-treatment range from 91% to 99%.

Table 5. Alternate estimates of 12-month post treatment recurrence RR-TB patients in Zhytomyr Oblast, Ukraine.

Treatment outcome Scenario 1 (n = 192) Scenario 2 (n = 192) Scenario 3 (n = 175)
n (%) n (%) n (%)
Recurrence free and alive at 12 months post-treatment 174 (91) 174 (91) 174 (99)
Died post treatment 17 (9) 18 (9) excluded
Relapse or recurrence 1 (<1) 1 (1)
LTFU post treatment excluded excluded Excluded

Scenario 1: included patients who died but did not count them as recurrences; Scenario 2: included patients who died as recurrent TB; Scenario 3: excluded patients who died from the calculations.

Factors associated with end-of-treatment outcomes

Multivariate regression analysis looking at the association between selected clinical and sociodemographic characteristics and unfavorable outcomes (death and LTFU), has shown that patients with a history of previous treatment with 1st or 2nd line drugs had a 2.38 times higher risk of unfavorable treatment outcomes compared to those with no history of previous treatment (95% CI 1.30 – 4.39). (Table 6).

Table 6. Multivariate analysis risk factors for unfavorable outcome among RR/MDR-TB in Zhytomyr Oblast, Ukraine.

Characteristic Univariate Multivariate
Risk Ratio 95% Conf. Interval p-Value Adjusted Risk Ratio 95% Conf. Interval p-Value
Sex
 Male 1 1
 Female 0.64 0.31 – 1.30 0.213 0.71 0.34 – 1.48 0.368
Age (years)
 0–44y 1 1
 45y+ 1.45 0.84 – 2.52 0.184 1.48 0.84 – 2.61 0.172
HIV status
 Negative 1
 Positive 0.69 0.34 – 1.37 0.287
Hepatitis C status
 No history 1
 History/active 1.38 0.72 – 2.65 0.331
Hepatitis B
 Non-reactive 1
 Reactive 1.80 0.32 – 10.03 0.504
Diabetes
 No 1
 Yes 1.07 0.28 – 3.99 0.924
Smoked cigarettes
 No 1
 Yes 1.10 0.60 – 2.01 0.752
Injectable drug use
 No 1 1
 Yes 2.05 0.66 – 6.34 0.213 1.61 0.50 – 5.17 0.424
Alcohol consumption
 Low consumption 1
 Hazardous and addiction 1.20 0.68 – 2.12 0.519
History of previous treatment
 No treatment history 1 1
 Previously treated with 1st or 2nd line drugs 2.53 1.39 – 4.61 0.002 2.38 1.29 – 4.38 0.005
Drug resistance profile
 Mono and Poly-resistance 1
 MDR TB 1.42 0.48 – 4.21 0.532
 Pre-XDR TB 1.53 0.54 – 4.31 0.417

Culture conversion

There were 249 patients with a positive culture result at baseline. Out of these patients, 45 died or were LTFU before six months and were excluded from the 6-month culture conversion analysis. Of the 204 patients, only one patient did not have culture conversion at six months. Overall, 50% of patients with a positive culture at baseline had culture conversion within 60 days of treatment initiation. The median time to culture conversion was 58 days (IQR 30–75).

Safety of the regimen

A total of 122 AEs were recorded. Most adverse events 37 (30%) were related to increased liver enzymes. Of our patients, 86/300 (29%) experienced at least one AE grade 3 or 4. The median number of grade 3–4 AEs per patient was 2 (IQR 1–2).

A total of 67 serious AEs were reported. Of our patients, 63/300 (21%) experienced at least one serious AEs. The full list of adverse events of interest is in Table 7. The type of drug that led to permanent change, the reason for the change and the outcomes of patients who underwent changes are presented in S1 Table, S2 Table and S3 Table, respectively).

Table 7. Proportion of patients with adverse events of interest among RR-TB patients in Zhytomyr Oblast, Ukraine.

Type of adverse events (at least once) Total (n = 300)
n (%)
Serious adverse events(1) 63 (21)
Grade 3 or 4 adverse events 86 (27)
QTc prolongation of any grade 61 (20)
Optic neuritis of any grade 5 (2)
Meeting Hy’s criteria for liver dysfunction(2) 46 (15)
Permanent change in treatment regimen(3) 79 (26)

(1)Any adverse events or reaction that results in death, permanent/significant disability or incapacity, hospitalization or prolongation of hospitalization to manage the adverse event, or is life-threatening.

(2)Defined as an ALT or AST more than 3 times the upper limits of normal, or a total bilirubin more than 2 times the upper limit of normal and no other reason can be found to account for these elevations.

(3)Defined as the decision by a study physician to stop one or more medications in the treatment regimen for more than 30 days.

BREF WHO QOL and PHQ9

To conduct the BREF WHO QOL and PHQ 9 analysis, we excluded 30 patients who had outcomes within the first three months after starting treatment and four patients under 17.

Overall, while the WHOQoL scores were low, there was a significant increase in the overall score at the end of treatment compared to baseline (p < 0.05) (Table 8). However, we did not observe any significant difference in the physical health and psychological domains at the end of treatment.

Table 8. Comparison of BREF WHO QOL at baseline and treatment completion (n = 180) among RR-TB patients in Zhytomyr Oblast, Ukraine.

Domain Baseline End of treatment t-test p-value
(for no difference)
Mean [Std. Dev] Mean [Std. Dev]
Physical health 55.39 (14.97) 55.24 (12.58) 0.92
Psychological 64.13 (16.18) 64.4 (15.92) 0.86
Social relationship 59.49 (24.31) 63.47 (25.20) 0.13
Environment 62.41 (16.29) 65.78 (16.69) 0.05
Overall 52.64 (21.63) 57.15 (21.43) 0.05

We observed a decline in the PHQ-9 scores from the baseline to the end of treatment. The average PHQ-9 score decreased significantly (p = 0.04) from 6.67 (standard deviation (SD) 4.75) at baseline to 5.34 (SD: 5.18) at the end of treatment.

Discussion

Our single-arm, operational research study of an RR/MDR-TB package of care, including a shorter, all-oral regimen recommended by WHO in June 2024 [13]. achieved high treatment success rates, even under stressful program conditions. These successful outcomes were sustained over a 12-month follow-up period after treatment completion. However, there was notable LTFU in the post-treatment period, as well as death and recurrent TB. That these results were achieved during the COVID-19 pandemic and a period of active war in Ukraine, suggests a high functional utility of our approach over a range of program settings.

The landscape for treating RR/MDR-TB has changed dramatically in the past five years. There are now multiple randomized controlled trials showing the utility of all-oral regimens lasting six to nine months. Some of these studies used regimens with a high pill burden [14]. Others utilized drugs that are not commonly available in programmatic settings, such as pretomanid or delamanid [1517]. In addition, treatment regimens used in randomized controlled trials tend to perform better than those same regimens used under program conditions and in populations that would normally be excluded from formal trials. Our results are similar to those seen in other cohort studies assessing all-oral shorter regimens for RR/MDR-TB1 [1822].

In addition to the all-oral shorter regimens used in our study, we offered a comprehensive package of patient support services beyond those routinely provided by the national TB program, including counseling, intensive nursing care, management of AUD and other comorbid conditions, and nutritional and social support. Our goal in offering these supporting services was to provide a person-centered experience for the patients being treated [23]. Our study found successful treatment outcomes among patients with AUD, people living with HIV and other comorbid conditions, along with significant improvements in quality of life and depression measures, pointing to the success of our inclusive approach. While much attention has been given to newer drugs and shorter regimens, offering psychosocial and socioeconomic support during RR/MDR-TB is likely to be just as important, especially under program conditions, where high rates of LTFU during treatment are still being reported despite the use of shorter regimens [24]. Given the high rates of substance use and other co-morbidities seen in our cohort, such support may have been even more important [25]. The impact of such support was likely even higher in the times of COVID-19 and the ongoing war with Russia. Our study methodology did not allow for separating the impact of the support package from the drug regimen on treatment success rates, and this is a limitation. We determined, however, that there was value in combining the two approaches from a humanitarian and programmatic point of view.

Although our operational research project showed high success rates overall, there were some worrisome findings. First, our study continued to show high rates of toxicity, with more than 20% of our patients experiencing a serious adverse event. Although these rates are similar to those reported in other studies, they emphasize the need for regimens that are both safer and better tolerated by people undergoing treatment for RR/MDR-TB. Second, there was a high rate of LTFU in the post-treatment period, where 18% of people with successful treatment outcomes at the end of treatment could not be assessed for long-term outcomes. This may have been due to disruptions in the country due to COVID-19 and the war, but it is possible that these patients may also have developed recurrent TB or died. In fact, when the post-treatment period is considered, only 172 of 300 patients (57.3%) could be confirmed as having treatment success. Most TB programs do not continue to follow patients after they have successfully completed treatment, even though the WHO recommends such follow-up. Our results suggest that investment in such follow-up is needed to determine the long-term impact of RR/MDR-TB treatment.

Conclusion

In conclusion, we report a high rate of successful treatment outcomes along with an improvement in the quality of life of patients amidst challenging conditions of the COVID-19 pandemic and war in Ukraine through the implementation of a person-centered model of care with all-oral short-course regimen. With the encouraging results from multiple randomized controlled trials with short course regimens it is time to also focus on developing person-centered models of care to deliver these regimens in a manner that, along with achieving successful treatment outcomes, leads to an improvement in the quality of life of people with RR-TB.

Supporting information

S1 Table. Type of drugs with permanent change (interruption >30 days) among RR-TB patients in Zhytomyr Oblast, Ukraine, April 2019 – March 2022.

(DOCX)

pgph.0003983.s001.docx (14.4KB, docx)
S2 Table. Reason of permanent drug changes (interruption >30 days) among RR-TB patients in Zhytomyr Oblast, Ukraine, April 2019 – March 2022.

(DOCX)

pgph.0003983.s002.docx (14.4KB, docx)
S3 Table. Outcome of patients with at least one permanent change on their regimen (interruption >30 days) among RR-TB patients in Zhytomyr Oblast, Ukraine, April 2019 – March 2022.

(DOCX)

pgph.0003983.s003.docx (14.2KB, docx)
S1 Checklist. Inclusivity in global research.

(DOCX)

pgph.0003983.s004.docx (65.2KB, docx)
S1 File. STROBE Checklist.

(DOCX)

pgph.0003983.s005.docx (33.3KB, docx)

Data Availability

Data will be available on https://nexo.msf.org/. In case of technical issues requests should be made to data.sharing@msf.org. For more information please see: 1) MSF’s Data Sharing Policy: https://www.msf.org/sites/msf.org/files/msf_data_sharing_policycontact_infoannexes_final.pdf 2) MSF’s Data Sharing Policy PLOS Medicine article: https://journals.plos.org/plosmedicine/article?id=10.1371/journal.pmed.1001562.

Funding Statement

Médecins Sans Frontières (MSF) provided support for this study in the form of salaries for VF, OT, SP, KM, YW, MD, VS, DD, CL, and PI. The specific roles of these authors are articulated in the ‘author contributions’ section. Research conducted by MSF employees is done so within the scope of their job specification. No other forms of support were provided specifically for the research. MSF was involved in study design, data collection, analysis, decision to publish and preparation of the manuscript.

References

  • 1.Global Tuberculosis Report 2023. World Health Organization; 2023. Available from; https://www.who.int/teams/global-programme-on-tuberculosis-and-lung-health/tb-reports/global-tuberculosis-report-2023 [Google Scholar]
  • 2.Collaborative Group for the Meta-Analysis of Individual Patient Data in MDR-TB treatment–2017, Ahmad N, Ahuja SD, Akkerman OW, Alffenaar J-WC, Anderson LF, et al. Treatment correlates of successful outcomes in pulmonary multidrug-resistant tuberculosis: an individual patient data meta-analysis. Lancet. 2018;392(10150):821–34. doi: 10.1016/S0140-6736(18)31644-1 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 3.Reid M, Agbassi YJP, Arinaminpathy N, Bercasio A, Bhargava A, Bhargava M, et al. Scientific advances and the end of tuberculosis: a report from the Lancet Commission on Tuberculosis. Lancet. 2023;402(10411):1473–98. doi: 10.1016/S0140-6736(23)01379-X [DOI] [PubMed] [Google Scholar]
  • 4.WHO operational handbook on tuberculosis. Module 4: treatment - drug-resistant tuberculosis treatment. Geneva: World Health Organization; 2020. Available from; https://iris.who.int/bitstream/handle/10665/332398/9789240006997-eng.pdf?sequence=1 [PubMed] [Google Scholar]
  • 5.ShORRT initiative. Available from: https://tdr.who.int/activities/shorrt-research-package [Google Scholar]
  • 6.Kumar AM, Harries AD, Satyanarayana S, Thekkur P, Shewade HD, Zachariah R. What is operational research and how can national tuberculosis programmes in low- and middle-income countries use it to end TB?. Indian J Tuberc. 2020;67(4S):S23–32. doi: 10.1016/j.ijtb.2020.11.009 [DOI] [PubMed] [Google Scholar]
  • 7.Gils T, Laxmeshwar C, Duka M, Malakyan K, Siomak OV, Didik VS, et al. Preparedness of outpatient health facilities for ambulatory treatment with all-oral short DR-TB treatment regimens in Zhytomyr, Ukraine: a cross-sectional study. BMC Health Serv Res. 2020;20(1):890. doi: 10.1186/s12913-020-05735-z [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 8.Plokhykh V, Duka M, Cassidy L, Chen C-Y, Malakyan K, Isaakidis P, et al. Mental health interventions for rifampicin-resistant tuberculosis patients with alcohol use disorders, Zhytomyr, Ukraine. J Infect Dev Ctries. 2021;15(9.1):25S-33S. doi: 10.3855/jidc.13827 [DOI] [PubMed] [Google Scholar]
  • 9.Division of AIDS (DAIDS) Table for Grading the Severity of Adult and Pediatric Adverse Events. National Institute of Allergy and Infectious Diseases; 2017. Available from: https://rsc.niaid.nih.gov/sites/default/files/daidsgradingcorrectedv21.pdf [Google Scholar]
  • 10.The endTB Project. endTB Clinical and Programmatic Guide for Patient Management with New TB Drugs. V3.3. 2016. Available from: https://endtb.org/sites/default/files/2016-11/endTB%20Guide%20for%20New%20TB%20Drugs%20Version%203.3.pdf [Google Scholar]
  • 11.Babor T, Higgins-Biddle J, Saunders J, Monteiro M. Audit the alcohol use disorders identification test guidelines for use in primary care. World Health Organization; n.d. [Google Scholar]
  • 12.Sauer SM, Mitnick CD, Khan U, Hewison C, Bastard M, Holtzman D. Estimating post-treatment recurrence after multidrug-resistant tuberculosis treatment among patients with and without human immunodeficiency virus: The impact of assumptions about death and missing follow-up. Clin Infect Dis. 2024;78:164–71. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 13.World Health Organization. Key updates to the treatment of drug-resistant tuberculosis: Rapid communication. Available from https://iris.who.int/bitstream/handle/10665/378472/B09123-eng.pdf?sequence=1 [Google Scholar]
  • 14.Goodall RL, Meredith SK, Nunn AJ, Bayissa A, Bhatnagar AK, Bronson G, et al. Evaluation of two short standardised regimens for the treatment of rifampicin-resistant tuberculosis (STREAM stage 2): an open-label, multicentre, randomised, non-inferiority trial. Lancet. 2022;400(10366):1858–68. doi: 10.1016/S0140-6736(22)02078-5 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 15.Nyang’wa B-T, Berry C, Kazounis E, Motta I, Parpieva N, Tigay Z, et al. A 24-Week, All-Oral Regimen for Rifampin-Resistant Tuberculosis. N Engl J Med. 2022;387(25):2331–43. doi: 10.1056/NEJMoa2117166 [DOI] [PubMed] [Google Scholar]
  • 16.Nyang’wa B-T, Berry C, Kazounis E, Motta I, Parpieva N, Tigay Z, et al. Short oral regimens for pulmonary rifampicin-resistant tuberculosis (TB-PRACTECAL): an open-label, randomised, controlled, phase 2B-3, multi-arm, multicentre, non-inferiority trial. Lancet Respir Med. 2024;12(2):117–28. doi: 10.1016/S2213-2600(23)00389-2 [DOI] [PubMed] [Google Scholar]
  • 17.Mok J, Lee M, Kim DK, Kim JS, Jhun BW, Jo K-W, et al. 9 months of delamanid, linezolid, levofloxacin, and pyrazinamide versus conventional therapy for treatment of fluoroquinolone-sensitive multidrug-resistant tuberculosis (MDR-END): a multicentre, randomised, open-label phase 2/3 non-inferiority trial in South Korea. Lancet. 2022;400(10362):1522–30. doi: 10.1016/S0140-6736(22)01883-9 [DOI] [PubMed] [Google Scholar]
  • 18.Ndjeka N, Campbell JR, Meintjes G, Maartens G, Schaaf HS, Hughes J, et al. Treatment outcomes 24 months after initiating short, all-oral bedaquiline-containing or injectable-containing rifampicin-resistant tuberculosis treatment regimens in South Africa: a retrospective cohort study. Lancet Infect Dis. 2022;22(7):1042–51. doi: 10.1016/S1473-3099(21)00811-2 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 19.Padmapriyadarsini C, Vohra V, Bhatnagar A, Solanki R, Sridhar R, Anande L, et al. Bedaquiline, Delamanid, Linezolid, and Clofazimine for Treatment of Pre-extensively Drug-Resistant Tuberculosis. Clin Infect Dis 2023; 76: e938–46. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 20.Hewison C, Khan U, Bastard M, Lachenal N, Coutisson S, Osso E, et al. Safety of Treatment Regimens Containing Bedaquiline and Delamanid in the endTB Cohort. Clin Infect Dis. 2022;75(6):1006–13. doi: 10.1093/cid/ciac019 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 21.Huerga H, Khan U, Bastard M, Mitnick CD, Lachenal N, Khan PY, et al. Safety and Effectiveness Outcomes From a 14-Country Cohort of Patients With Multi-Drug Resistant Tuberculosis Treated Concomitantly With Bedaquiline, Delamanid, and Other Second-Line Drugs. Clin Infect Dis. 2022;75(8):1307–14. doi: 10.1093/cid/ciac176 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 22.Conradie F, Bagdasaryan TR, Borisov S, Howell P, Mikiashvili L, Ngubane N, et al. Bedaquiline-Pretomanid-Linezolid Regimens for Drug-Resistant Tuberculosis. N Engl J Med. 2022;387(9):810–23. doi: 10.1056/NEJMoa2119430 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 23.Harrison RE, Shyleika V, Falkenstein C, Garsevanidze E, Vishnevskaya O, Lonnroth K, et al. Patient and health-care provider experience of a person-centred, multidisciplinary, psychosocial support and harm reduction programme for patients with harmful use of alcohol and drug-resistant tuberculosis in Minsk, Belarus. BMC Health Serv Res. 2022;22(1):1217. doi: 10.1186/s12913-022-08525-x [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 24.Memani B, Beko B, Dumile N, Mohr-Holland E, Daniels J, Sibanda B, et al. Causes of loss to follow-up from drug-resistant TB treatment in Khayelitsha, South Africa. Public Health Action. 2022;12(2):55–7. doi: 10.5588/pha.21.0083 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 25.Günther G, Guglielmetti L, Leu C, Lange C, van Leth F, Tuberculosis Network European Trials group. Availability and costs of medicines for the treatment of tuberculosis in Europe. Clin Microbiol Infect. 2023;29(1):77–84. doi: 10.1016/j.cmi.2022.07.026 [DOI] [PMC free article] [PubMed] [Google Scholar]
PLOS Glob Public Health. doi: 10.1371/journal.pgph.0003983.r002

Decision Letter 0

N Sarita Shah

11 Feb 2025

PGPH-D-24-02638

End of treatment and 12-month post-treatment outcomes in patients treated with all-oral regimens for rifampicin-resistant tuberculosis in Ukraine

PLOS Global Public Health

Dear Dr. Isaakidis,

Thank you for submitting your manuscript to PLOS Global Public Health. After careful consideration, we feel that it has merit but does not fully meet PLOS Global Public Health’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

Please submit your revised manuscript by Mar 28 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at globalpubhealth@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pgph/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:

  • A rebuttal letter that responds to each point raised by the editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.

  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.

  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

We look forward to receiving your revised manuscript.

Kind regards,

N. Sarita Shah

Academic Editor

PLOS Global Public Health

Journal Requirements:

1. Please include a complete copy of PLOS’ questionnaire on inclusivity in global research in your revised manuscript. Our policy for research in this area aims to improve transparency in the reporting of research performed outside of researchers’ own country or community. The policy applies to researchers who have travelled to a different country to conduct research, research with Indigenous populations or their lands, and research on cultural artefacts. The questionnaire can also be requested at the journal’s discretion for any other submissions, even if these conditions are not met. Please find more information on the policy and a link to download a blank copy of the questionnaire here: https://journals.plos.org/globalpublichealth/s/best-practices-in-research-reporting. Please upload a completed version of your questionnaire as Supporting Information when you resubmit your manuscript.

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Does this manuscript meet PLOS Global Public Health’s publication criteria ? Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe methodologically and ethically rigorous research with conclusions that are appropriately drawn based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

**********

2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

**********

3. Have the authors made all data underlying the findings in their manuscript fully available (please refer to the Data Availability Statement at the start of the manuscript PDF file)?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception. The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: No

Reviewer #2: Yes

**********

4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS Global Public Health does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: No

Reviewer #2: Yes

**********

5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: Overall, this is a well conducted observational study assessing person level outcomes for the treatment of MDR/RR-TB using oral, short treatment regimens. Given the difficult context in which the study was conducted, these data are important to demonstrate how such treatment can be provided and good outcomes achieved. The study is therefore relevant to a wide reader audience.

Major comment:

The manuscript would be greatly improved by following STROBE guidance for presentation of observational studies; see https://www.equator-network.org/reporting-guidelines/strobe/ This would include clearer presentation of the baseline characteristics of the study cohort and a flow diagram describing eligibility, inclusion and exclusion for the study.

Other comments:

• Lines 108-109: there is mention of treatment education, but a much more detailed description is given later – perhaps to exclude here?

• Lines 110-112: the section describing the provision of ambulatory care as different from national policy could be clarified.

• Line 147: how was adherence assessed?

• Define acronyms at first use, eg. PWID

• Box 1: How was the community engaged to provide support to patients and families?

• Under results, there appear to be 2 sections titled “end of treatment outcomes”.

• Please revise language to refer to ‘treatment failure” rather than “failed”, which implies that the individuals themselves have failed in some way.

• Were any post-treatment outcomes available for people who had treatment outcomes of “treatment failure” or LTFU? I see this is described in the discussion, but could be presented in the results.

• For table 5, please add a description of each scenario to the table legend.

• For the time to culture conversion analysis, was it not possible to censor for death and LTFU? Rather than exclude these patients completely? Additionally, you report time to culture conversion by alcohol use, but no other factors; were any other relevant factors significant? Eg. extent of drug resistance or previous TB treatment?

• Perhaps to clarify why pregnancy during treatment might be considered an adverse event?

• The methods mention deep sequencing, but no data pertaining to this is presented. What was the purpose of deep sequencing of TB isolates?

• To clarify that the majority of patients would have completed treatment by the time of the Russian invasion of Ukraine in Feb 2022 – does this mean that the modified treatment provisions were perhaps only relevant for the post-treatment period for most patients?

Reviewer #2: General Comments:

The treatment of rifampin-resistant TB (RR-TB) has changed dramatically over the past 10 years—most notably with the change from 18-24 month injectable-based regimens to 6-9 month all-oral regimens incorporating new and repurposed medications. Many prior cohort studies have reported RR-TB treatment outcomes from a variety of programmatic settings around the world. Context is often key, however, when interpreting and comparing results from different countries as some settings lack access to newer diagnostics or medications, while others may partner with NGOs to provide additional patient-centered support.

In this manuscript, authors from Medecins Sans Frontieres report their experience supporting an RR-TB program in Ukraine over a time period spanning both the emergence of the COVID pandemic and the start of the war with Russia.

Clearly, the real-life challenges to providing (and completing) RR-TB care in this setting are vast, yet the authors demonstrate that they were able to achieve startlingly favorable end-of-treatment outcomes. The paper is very well-written and clear (though there are a number of typographical and formatting errors). Importantly, the authors emphasize not only the mechanics of providing treatment, but also of supporting patients socially to ensure treatment completion. Participants were administered quality-of-life questionnaires. Of particular value is that the authors also captured post-treatment outcomes 12-months after treatment completion. They note high rates of LTFU in this post-treatment period and raise the possibility that relapse/death could be much higher in the long-term, even if end-of-treatment outcomes were favorable. The data are a valuable contribution to the literature and should serve as a model to others trying to set up or maintain RR-TB services in conflict-areas.

Specific Comments:

ABSTRACT

1) Line 47, Results: Suggest delete the word “and.”

INTRODUCTION

1) Why are dates of enrollment are highlighted throughout the manuscript?

2) Line 98: “prevalence…” Suspect that the authors mean “incidence” here.

3) Line 100: Would consider using a word other than “Dispensary.” Although this is what they are called in Ukraine, the term “dispensary” in the rest of the world more often refers to a pharmacy. Could say “TB referral hospital” or “TB specialist hospital/center” instead.

4) Line 100: “The dispensary also coordinated the ambulatory care…” How so? Do patients go there for outpatient care or does the dispensary arrange for patients to be seen at some decentralized clinic instead?

5) Line 114: “…outpatient facilities…” See comment above. How close are these facilities? Are they spread out over a wide geographic area? Close to patients’ homes?

METHODS

1) No methods are provided for the logistic regression presented in the Results. How were covariates selected for the multivariable model?

RESULTS

1) Line 244: “End…” is not bolded while the rest of the heading is.

2) Line 247: “(Table & 3)”: Typo

3) Lines 250-1: The placement of the percentages and p-values in the sentences is confusing.

4) Lines 255-6: “Of our patients, 233 (78%) were male, had a median age of 45 years…” Grammatical error. Would rephrase.

5) Line 258: Would avoid the non-person-centered term “smoker” (suggest “smoked cigarettes”).

6) Line 260: “Error! (Reference source not found)”—Likely typographical error.

7) Line 261-269: This paragraph appears to have been completely duplicated ( lines 244-252)

8) Line numbers start again from 1 halfway through the RESULTS.

9) Second line 4: Suggest “…with a median time to death of 7.9 months…”

10) Second lines 34-6: “…45 died or were LTFU before six months and were excluded from the 6-month culture-conversion analysis.” There are many different philosophies about the best approach in the longitudinal analysis of culture conversion. Excluding those who die or who are LTFU clearly introduces a survival bias to even be eligible for the analysis. One could argue that Death prior to culture conversion is, itself, strongly associated with NOT converting. That said, not everyone who is LTFU necessary fails to convert (just as not everyone who dies does so from TB) so including them in the analysis may negatively skew the results. Regardless, however, the authors should simply provide a clear justification of their approach and explain why their approach will minimize certain biases while acknowledging that it may introduce others.

11) Second line 49: Would suggest providing the number of participants as well as the total number of AEs.

12) Second Line 52: “experience” should be “experienced.”

13) Second Line 53: “The full list of…” Sentence appears to have been truncated erroneously.

14) Second Line 54: “Table.” (Is there a table missing? Not numbered. Typo?)

DISCUSSION

1) Second line 117: Suspect that the authors mean “serious” rather than “severe.”

TABLES/FIGURES/BOXES

Box 1:

1) The verb tense varies in the “expected outcomes” column (e.g., “Patients realize….” vs. “Patients learned….” vs. “Family members understand….” Would encourage consistent use of one tense (probably present or future if this an “expected” rather than observed outcome).

2) Define abbreviations in the Box (AUD, SUD, VOT, SAT, etc).

3) In the last section (“Community Support”), part of “Involving communities” is bolded in error.

Table 1

4) See earlier comment about the term “smoker.”

Table 2

5) The number 6 in the footnotes should be a superscript.

Table 6

6) How were characteristics selected for inclusion in the multivariable analysis? Three of the four included covariates had a p-value >0.1 even in bivariate analysis.

Table 7

7) Second line 60: Footnote 2: Suggest deleting the word “which.”

8) Second line 62: Suggest deleting the first clause and beginning with “Defined as the decision…”

9) In this table it says that 79 participants had a permanent change in regimen due to AEs, but in supplemental table S2 this number is only 13.

Table 8

10) Footnotes are not provided for 1-5?

Supplementary Table S1

11) Although mention is made in the Methods about “Permanent changes.,” the supplementary tables are not referenced anywhere in the main text.

12) Hard to interpret this table without knowing how many patients got each drug. It looks as though levofloxacin is very poorly tolerated. It might be more helpful if Tables S1 and S2 were combined so that one could see WHY each drug was stopped (I suspect that levofloxacin was stopped for resistance, while clofazimine was stopped for side effects).

13) What is the denominator for this table? Participants? Why only 95?

**********

6. PLOS authors have the option to publish the peer review history of their article (what does this mean? ). If published, this will include your full peer review and any attached files.

Do you want your identity to be public for this peer review? If you choose “no”, your identity will remain anonymous but your review may still be made public.

For information about this choice, including consent withdrawal, please see our Privacy Policy .

Reviewer #1: No

Reviewer #2: No

**********

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.

PLOS Glob Public Health. doi: 10.1371/journal.pgph.0003983.r004

Decision Letter 1

N Sarita Shah

24 Apr 2025

End of treatment and 12-month post-treatment outcomes in patients treated with all-oral regimens for rifampicin-resistant tuberculosis in Ukraine: a prospective cohort study

PGPH-D-24-02638R1

Dear Dr. Isaakidis,

We are pleased to inform you that your manuscript 'End of treatment and 12-month post-treatment outcomes in patients treated with all-oral regimens for rifampicin-resistant tuberculosis in Ukraine: a prospective cohort study' has been provisionally accepted for publication in PLOS Global Public Health.

Before your manuscript can be formally accepted you will need to complete some formatting changes, which you will receive in a follow up email. A member of our team will be in touch with a set of requests.

Please note that your manuscript will not be scheduled for publication until you have made the required changes, so a swift response is appreciated.

IMPORTANT: The editorial review process is now complete. PLOS will only permit corrections to spelling, formatting or significant scientific errors from this point onwards. Requests for major changes, or any which affect the scientific understanding of your work, will cause delays to the publication date of your manuscript.

If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they'll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact globalpubhealth@plos.org.

Thank you again for supporting Open Access publishing; we are looking forward to publishing your work in PLOS Global Public Health.

Best regards,

N. Sarita Shah

Academic Editor

PLOS Global Public Health

***********************************************************

Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 Table. Type of drugs with permanent change (interruption >30 days) among RR-TB patients in Zhytomyr Oblast, Ukraine, April 2019 – March 2022.

    (DOCX)

    pgph.0003983.s001.docx (14.4KB, docx)
    S2 Table. Reason of permanent drug changes (interruption >30 days) among RR-TB patients in Zhytomyr Oblast, Ukraine, April 2019 – March 2022.

    (DOCX)

    pgph.0003983.s002.docx (14.4KB, docx)
    S3 Table. Outcome of patients with at least one permanent change on their regimen (interruption >30 days) among RR-TB patients in Zhytomyr Oblast, Ukraine, April 2019 – March 2022.

    (DOCX)

    pgph.0003983.s003.docx (14.2KB, docx)
    S1 Checklist. Inclusivity in global research.

    (DOCX)

    pgph.0003983.s004.docx (65.2KB, docx)
    S1 File. STROBE Checklist.

    (DOCX)

    pgph.0003983.s005.docx (33.3KB, docx)
    Attachment

    Submitted filename: Response to Reviewers.docx

    pgph.0003983.s007.docx (28.2KB, docx)

    Data Availability Statement

    Data will be available on https://nexo.msf.org/. In case of technical issues requests should be made to data.sharing@msf.org. For more information please see: 1) MSF’s Data Sharing Policy: https://www.msf.org/sites/msf.org/files/msf_data_sharing_policycontact_infoannexes_final.pdf 2) MSF’s Data Sharing Policy PLOS Medicine article: https://journals.plos.org/plosmedicine/article?id=10.1371/journal.pmed.1001562.


    Articles from PLOS Global Public Health are provided here courtesy of PLOS

    RESOURCES