Table 1.
Primer sequences employed for the detection of antibiotic resistance genes
| Genes | Primers | Primer sequences (5’ to 3’) | Size (bp) | Reference |
|---|---|---|---|---|
| BlaTEM | OT-F | 5’-ATTGGGTGCACGAGTGGGTTAC-3’ | 465 | Moussé et al. 2016 |
| OT-R | 5’-ATAATTGTTGCCGGGAAGCTAG-3’ | |||
| blaSHV | SHV-F | 5’-CGCCGGGTTATTCTTATTTGTCGC-3’ | 1017 | Moussé et al. 2016 |
| SHV-R | 5’-TCTTTCCGATGCCGCCGCCAGTCA3’ | |||
| blaCTX | CTX-F | 5’-CGCTTTGCGATGTGCAG-3’ | 550 | Moussé et al. 2016 |
| CTX-R | 5’-ACCGCGATATCGTTGGTAAT-3’ | |||
| qnrA | qnrA-F | F: 5’-ATTTCTCACGCCAGGATTTG-3’ | 516 | Jacoby et al. 2014 |
| QnrA-R | R: 5’-GATCGGCAAAGGTTAGGTCA-3’ | |||
| qnrB | QnrB-F | F :5’-GATCGTGAAAGCCAGAAAGG-3’ | 469 | Buelow et al.2018 |
| QnrB-R | R :5’-ACGATGCCTGGTAGTTGTCC-3’ | |||
| qnrS | QnrS-F | F :5’-ACGACATTCGTCAACTGCAA-3’ | 416 | Buelow et al.2018 |
| QnrS-R | R :5’-TAAATTGGCACCCTGTAGGC-3’ | |||
| IntI 1 | IntI − 1-F | F: CCTCCCGCACGATGATC | 280 | Goldstein et al.2001 |
| IntI 1-R | R: TCCACGCATCGTCAGGC | |||
| IntI 2 | IntI − 2-F | F: TTATTGCTGGGATTAGGC | 233 | |
| IntI-2-R | R: ACGGCTACCCTCTGTTATC | |||
| IntI 3 | IntI-3-F | F: AGTGGGTGGCGAATGAGTG | 600 | |
| IntI-3-R | R: TGTTCTTGTATCGGCAGGTG |