Table 2. List of image sets used for training, validating, and testing MNFinder.
| Cell_type | DNA_Label | Integrity_label | Max_Int_Proj | Objective mag. | Microscope | Initial image resolution (px/um) | Scaled_image_resolution | Number_images | Training | Validation | Test |
|---|---|---|---|---|---|---|---|---|---|---|---|
| HeLa | H2B-GFP | None | Y | 40 | Confocal_LSM | 5.6 | 2.8 | 1 | 1 | ||
| HeLa | DAPI | None | Y | 40 | Confocal_LSM | 5.6 | 2.8 | 6 | 3 | 1 | 2 |
| HeLa | DAPI | None | N | 20 | Confocal_LSM | 2.8 | 2.8 | 4 | 4 | ||
| hTERT-HFF | DAPI | H3K27-acetyl | Y | 40 | Confocal_Spinning_Disk | 3.9 | 1.95 | 4 | 4 | ||
| hTERT-RPE1 | DAPI | 2xRFP-NLS | Y | 40 | Confocal_LSM | 5.6 | 2.8 | 2 | 2 | ||
| hTERT-RPE1 | H2B-emiRFP703 | NLS-3xDendra2 | N | 20 | Widefield | 1.55 | 1.55 | 16 | 14 | 1 | 1 |
| MCC13 | DAPI | None | N | 20 | Confocal_LSM | 2.8 | 2.8 | 3 | 3 | ||
| U2OS | DAPI | H3K27-acetyl | Y | 20 | Confocal_LSM | 2.8 | 2.8 | 1 | 1 | ||
| U2OS | DAPI | H3K27-acetyl | Y | 40 | Confocal_LSM | 5.6 | 2.8 | 1 | 1 | ||
| U2OS | H2B-emiRFP703 | NLS-3xDendra2 | N | 20 | Widefield | 1.55 | 1.55 | 8 | 6 | 1 | 1 |
| Total: | 46 | 30 | 3 | 13 |