Skip to main content
PLOS One logoLink to PLOS One
. 2025 Jun 4;20(6):e0325330. doi: 10.1371/journal.pone.0325330

Gene editing therapy as a therapeutic approach for cardiovascular diseases in animal models: A scoping review

Quan Duy Vo 1,2,*
Editor: Chen Ling3
PMCID: PMC12136301  PMID: 40465697

Abstract

Background

Cardiovascular diseases (CVDs) are the leading cause of mortality worldwide, with hereditary genetic factors contributing substantially to disease burden. Current treatments, including lifestyle modifications, pharmacotherapy, and surgical interventions, focus primarily on symptom management but fail to address underlying genetic causes, often resulting in disease progression or recurrence. Gene therapy has emerged as a transformative approach, offering a potential treatment. This review explores its efficacy and safety in animal models, identifying opportunities for future advancements.

Methods

This review investigated studies on gene editing interventions in animal models of CVDs, retrieved from PubMed, ScienceDirect, and Web of Science up to December 2024.

Result

A total of 57 studies were included in this review. Mice (86%) were the predominant model, with CRISPR-Cas9 (53%) and AAV vectors (80%) as the most used tools. Key targets included PCSK9 (32%), LDLR (9%), and MYH6/7 (7%), achieving 25–85% editing efficiency in liver/heart tissues. Base editors (ABE/CBE) showed superior safety, with <1% off-targets versus CRISPR-Cas9’s 2–5 off-targets per guide. Reported toxicity risks included liver injury (AAVs, 23%) and transient cytokine elevation (LNPs, 14%).

Conclusion

Gene editing therapy shows great potential for treating CVDs, with high efficiency, strong therapeutic outcomes, and favorable safety in animal models. Continued innovation and rigorous evaluation could transform cardiovascular treatment, benefiting patients with untreatable conditions.

Introduction

Cardiovascular diseases (CVDs) are the leading cause of mortality worldwide, accounting for approximately 17.9 million deaths annually, which represents 32% of all global deaths [1]. In the United States alone, heart disease is responsible for about 697,000 deaths each year, equating to one in every five deaths. The prevalence of CVDs increases with age, affecting 24.2% of adults aged 75 and over [2]. Despite remarkable progress in preventive measures and treatments, CVD prevalence continues to rise due to population aging and the increasing prevalence of associated risk factors such as hyperlipidemia, hypertension, and diabetes [3]. Importantly, a substantial proportion of CVD cases have a hereditary component, driven by genetic factors that predispose individuals to conditions like familial hypercholesterolemia, hypertrophic cardiomyopathy, and inherited arrhythmias [4,5]. Traditional therapeutic approaches for CVDs primarily focus on managing symptoms and mitigating risk factors. These include lifestyle modifications, pharmacotherapy to control blood pressure and cholesterol levels, and surgical interventions to address structural heart issues. While these strategies have proven beneficial, they often require lifelong adherence and may not address the underlying genetic causes of the disease [6].

Gene therapy has emerged as a transformative approach for addressing both inherited and acquired cardiovascular conditions [7]. By enabling precise modifications to the genetic basis of these diseases, gene therapy provides the potential to correct or mitigate genetic mutations responsible for cardiovascular disorders such as hypertrophic cardiomyopathy and familial hypercholesterolemia. Early therapies introduced functional gene copies to restore normal function. However, these efforts faced significant challenges, including limited delivery efficiency and immune responses that hindered their effectiveness [8]. The advances in vector technology, particularly the development of adeno-associated viruses (AAVs), significantly improved the safety, specificity, and efficiency of gene delivery to cardiovascular tissues [9]. A pivotal advancement in the gene therapy landscape is the introduction of CRISPR-Cas9 (Clustered Regularly Interspaced Short Palindromic Repeats-associated protein 9). These technologies enable precise editing of specific genomic sequences, offering a groundbreaking approach to directly correct disease-causing mutations at their source and thereby address the underlying genetic causes of cardiovascular diseases [10].

Fundamentally, gene editing distinguishes itself from conventional therapies through its target specificity and durability. Unlike traditional treatments that continuously address symptoms without correcting the genetic causes, gene editing offers a permanent, one-time correction of pathogenic genetic variants [11]. Given these considerable advancements, there is growing interest in translating gene editing technologies into viable therapeutic strategies for cardiovascular diseases. This review aims to evaluate the current landscape of gene editing applications in the treatment of cardiovascular diseases using animal models. By synthesizing existing research, we seek to elucidate the therapeutic potential, efficacy, and safety of gene editing interventions in preclinical settings. Furthermore, this review will identify existing knowledge gaps and propose directions for future research, ultimately contributing to the advancement of gene-based therapies for cardiovascular diseases.

Materials and methods

This review was conducted in accordance with the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines, ensuring a transparent and comprehensive synthesis of existing literature [12].

Eligibility criteria

The inclusion criteria encompassed original research articles that examined gene editing interventions, including CRISPR-Cas9, transcription activator-like effector nucleases (TALENs), and zinc finger nucleases (ZFNs), in animal models of CVDs. Eligible studies were required to report on therapeutic efficacy, safety, and outcomes. Articles were excluded if they were not original research (review articles, conference abstracts/posters), did not involve gene editing for therapeutic purposes, or were published in languages other than English.

Search strategy

A systematic literature search was conducted across multiple databases, including PubMed, Embase, and Web of Science, covering publications up to December 2024. The search strategy incorporated a combination of keywords and Medical Subject Headings (MeSH) terms related to gene editing (e.g., CRISPR, base editing, prime editing, zinc finger nucleases, and TALEN), cardiovascular diseases (e.g., heart disease and cardiomyopathy), and animal models (e.g., mouse, rat, pig, and non-human primates).

In addition to database searches, relevant studies were identified through manual reference screening, ensuring inclusion of key publications that may not have been captured by the initial search strategy.

Data extraction

Data extraction was performed using a standardized form to collect key information from each study, including authorship, publication year, animal model species, sample size, gene editing technology, target genes, delivery methods, therapeutic efficacy, safety outcomes, and main findings.

Quality assessment

The methodological quality of the included studies was evaluated using the Animal Research: Reporting of In Vivo Experiments (ARRIVE) guidelines, focusing on aspects such as study design, statistical analysis, and ethical considerations [13].

Result

Initially, a total of 995 articles were identified from three electronic databases. After removing 152 duplicates, 843 studies proceeded to title and abstract screening based on the predefined inclusion criteria. Following this screening process, 201 articles were deemed eligible for full-text evaluation. However, a thorough review led to the exclusion of 144 studies, ultimately including 57 studies in this review (Fig 1).

Fig 1. Study flow-chart.

Fig 1

Overview of included studies

A total of 57 studies were included in this review, evaluating the role of gene editing in cardiovascular disease models. The majority of studies (86%, 43/50) used mice, reflecting their cost-effectiveness, genetic tractability, and well-characterized cardiovascular physiology. Larger animal models, such as non-human primates (NHPs, 7%) and pigs (5.2%), were primarily employed for translational validation (Table 1).

Table 1. Distribution of animal models.

Species/Strain Frequency Percentage (%) Notes
Mice 49 86% Most common: C57BL/6, LDLR ⁻ / ⁻ , ApoE ⁻ /⁻
Rats 2 3.5% Sprague-Dawley (1), MYL4-E11K (1)
Hamsters 2 3.5% LDLR ⁻ / ⁻ model
Rabbits 2 3.5% LDLR ⁻ /⁻ (1), APOC3-KO (1)
Pigs 3 5.2% Domestic pigs, Yucatan mini-pigs
Non-Human Primates (NHPs) 4 7% Cynomolgus macaques (3), Rhesus (1)

CRISPR-Cas9 was the most prevalent gene editing method, used in 30 (53%) of studies. Its dominance is largely attributed to its high efficiency and broad versatility in genome editing applications. Base editors, including adenine base editors (ABEmax, ABE8e) and cytidine base editors (CBE such as BE3), accounted for 20% of the studies. These tools have gained increasing attention due to their ability to introduce precise single-nucleotide changes without generating double-strand breaks. Other systems were used less frequently, including meganucleases (2%) and RNA-targeting CRISPR variants like CRISPR-Cas13d (2%), typically applied in specialized contexts requiring high specificity or RNA-level editing. A small number of studies also investigated alternative approaches such as CRISPR-Cas10 or gene silencing strategies like shRNA knockdown.

Among gene delivery methods, adeno-associated virus (AAV) vectors emerged as the predominant delivery system for in vivo gene editing, utilized in 80% of the included studies. Among these, AAV9 (40%) and AAV8 (25%) were the most frequently employed serotypes, primarily due to their strong tissue tropism for the liver and heart. Non-viral delivery approaches, particularly lipid nanoparticles (LNPs), were implemented in approximately 19% of studies, reflecting growing interest in transient and efficient gene transfer methods that avoid the risks associated with viral integration. Adenoviral vectors were used in 9% of studies, although their application has diminished in recent years owing to immunogenicity concerns. Other delivery methods, including plasmid electroporation, microinjection (commonly for embryonic gene editing), and virus-like particles, were employed only in a limited number of cases. (Fig 2).

Fig 2. Gene editing system employed in the included studies.

Fig 2

Gene selection and target organs

The most frequently edited gene was PCSK9 (32%, 18 studies), a key regulator of LDL cholesterol, reflecting its prominence in hypercholesterolemia models. Beyond metabolic targets, several studies focused on genes implicated in cardiomyopathies and heart failure. MYH6 and MYH7, which encode cardiac myosin heavy chains and are frequently mutated in hypertrophic cardiomyopathy (HCM), were edited in 10% of studies to correct sarcomeric dysfunction. Other notable targets include PLN (phospholamban), involved in calcium handling abnormalities in dilated cardiomyopathy (DCM), and RBM20, a gene associated with RNA splicing defects in heart failure. In addition, muscle-related disorders were also addressed, with DMD (dystrophin) targeted in 6% of studies aiming to restore protein expression in Duchenne muscular dystrophy-associated cardiomyopathy. The distribution of these gene-editing efforts reflected organ-specific priorities, with the liver and heart being the primary targets, consistent with the physiological relevance of the genes involved.

Gene editing efficiency

Gene editing efficiency – defined as the proportion of cells or alleles successfully edited – varied across studies depending on the editing tool and delivery method. Table 1 summarizes these efficiencies alongside each study’s target gene, editing platform, and delivery strategy, with values representing the maximum in vivo editing achieved.

CRISPR-Cas9 generally produced high editing efficiencies, particularly in liver targets, with indel rates commonly ranging from 40% to 85%, and in some cases reaching up to ~95%. For instance, liver editing efficiencies reached 67% in PCSK9 [14], while cardiac editing, such as MYH6 inactivation, achieved up to 72% [15]. Base editors (ABE/CBE) showed moderate but therapeutically relevant DNA editing rates (typically 15–70%), with some studies reporting up to 63% efficiency [16]. RNA editing efficiencies were even higher, reaching up to 99,2% in SCN5a correction [17].

Delivery methods also played a critical role. AAVs yielded high and stable editing in liver and heart tissues, though efficiency was dose-dependent, requiring doses between 1 × 1011 and 1 × 1013 vg/kg. LNPs, while offering rapid hepatocyte uptake and detectable editing within 48 hours, typically provided transient expression (Table 2).

Table 2. Gene editing efficiency.

Study Target Gene Gene Editing Tool Delivery Method Editing Efficiency
Alba Carreras, 2019 [18] PCSK9 Cas9, BE3 AdV 10–35% (Cas9/BE3)
Alexandra C. Chadwick, 2018 [19] ANGPTL3 BE3 AdV 35% (liver, day 7)
Andreas C. Chai, 2023 [20] MYH7 ABEmax-VRQR Dual AAV9 35% (DNA), 12.9–26.7% (RNA)
Bin Li, 2021 [21] XIRP1 Overexpression AAV9 N/A (functional rescue only)
Camilo Breton, 2020 [14] PCSK9 Meganuclease AAV8 67% (mice), 15–43% (NHPs)
Chengzu Long, 2016 [22] DMD SpCas9 AAV9 25.5% (TA muscle), 70% (heart)
Daniel Reichart, 2023 [15] MYH6 ABE8e Dual AAV9 81% (cDNA), 16% (gDNA)
F Ann Ran, 2015 [23] PCSK9 SaCas9 AAV8 >40% indels (liver)
Handan Hu, 2022 [24] MYL4 Overexpression AAV9 N/A (protein restored)
Hao Yin, 2017 [25] PCSK9 e-sgRNA + Cas9 mRNA LNP 83% (Pcsk9), > 40% (Fah)
Hengzhi Du, 2024 [26] CRT CRISPR-Cas9 AAV9 63.3% (DNA), 88% (RNA)
Huan Zhao, 2020 [27] LDLR CRISPR-Cas9 AAV8 6.7% HDR, 25% indels
Jaydev Dave, 2022 [28] PLN SaCas9 AAV9 72% (LV inactivation)
Jessie R. Davis, 2022 [29] PCSK9/ANGPTL3 ABE8e AAV8/AAV9 44–61% (liver)
Jiacheng Li, 2022 [30] Meis1/Hoxb13 CasRx AAV9 65.2% (Meis1), 83.6% (Hoxb13)
Jing Gong, 2020 [31] PCSK9/ANGPTL3 CRISPR-Cas9 LipoMSN 24.8% (Pcsk9), 7.2% (Angptl3)
Jonathan D. Finn, 2018 [32] TTR SpyCas9 LNP ~70% (liver)
Jonathan M. Levy, 2020 [33] NPC1 ABEmax/CBE3.9max Dual AAV 38% (liver, ABE), 21% (CBE)
Kelsey E. Jarrett, 2017 [34] LDLR/ApoB SpyCas9 AAV8 54.3% (Ldlr), 74.1% (Apob)
Kelsey E. Jarrett, 2019 [35] LDLR SaCas9 AAV8 31.9% (males), 33.1% (females)
Kiran Musunuru, 2021 [16] PCSK9 ABE8.8 LNP 63–66% (hepatocytes)
Lei Huang, 2017 [36] ApoE/LDLR CRISPR-Cas9 Electroporation N/A (knockout confirmed)
Li Xu, 2019 [37] DMD Cas10 AAVrh.74 11.1% (cardiomyocytes)
Lili Wang, 2021 [38] PCSK9 Meganuclease AAV8/AAV3B 9.5–64.4% (liver)
Lingmin Zhang, 2019 [39] PCSK9 CRISPR/Cas9 Gal-LGCP 60% (liver)
Lisa N. Kasiewic, 2023 [40] LDLR ABE8.8 GalNAc-LNP 61% (liver)
Luzi Yang, 2024 [41] CaMKIIδ Adenine Base Editor AAV9 >90% reduction transgene-positive cells (liver)
Luzi Yang, 2024 [42] LMNA Adenine Base Editor Dual AAV system 20% at bystander site
~8% at the disease-causing site
Man Qi, 2024 [17] SCN5a ABEmax Dual AAV9 43.04% (DNA), 99.2% (RNA)
Marco De Giorgi, 2021 [43] ApoA1 SaCas9 Dual AAV8 54% (indels), 7.8% (HDR)
Markus Grosch, 2022 [44] RBM20 ABE AAVMYO 21.4% (DNA), 71% (RNA)
Mengmeng Guo 2020 [45] ApoC3 CRISPR/Cas9 zygote microinjection Not report
Min Qiu, 2021 [46] ANGPTL3 SpCas9 LNP 38.5% (liver)
Ping Yang, 2024 [47] MYH6 Cas13d AAV9 27.1–32% (RNA knockdown)
Qian Li, 2021 [48] PCSK9 SaCas9 AAV8 25–45% (liver)
Qiang Cheng, 2020 [49] PCSK9/PTEN Cas9 mRNA/RNP LNP ~60% (Pcsk9), 14% (PTEN)
Qiurong Ding, 2014 [50] PCSK9 SpCas9 AdV 50% (liver)
Richard G. Lee, 2023 [51] PCSK9 ABE8.8m LNP 46–70% (liver)
Rui Lu, 2018 [52] LDLR CRISPR-Cas9 Microinjection N/A (knockout confirmed)
Samagya Banskota, 2022 [53] PCSK9 ABEmax VLPs 63% (hepatocytes)
Shijie Liu, 2021 [54] Sav shRNA AAV9 N/A (functional rescue)
Shuhong Ma, 2021 [55] MYH6 ABEmax-NG Microinjection/AAV9 62.5% (embryos), 25.3% (AAV9)
Shuo Wu, 2024 [56] MYBPC3 Base editing Dual AAV9 5-10% mutation correction (heart)
38%–100% protein recovery
Simon Lebek, 2023 [57] CaMKIIδ ABE8e-SpRY Dual AAV9 7.5–8.4% (DNA), 46–85.7% (RNA)
Simon Lebek, 2023 [58] CaMKIIδ ABE8e-SpCas9-NG Microinjection N/A (phenotypic rescue)
Simon Lebek, 2024 [59] CAMK2D ABE8e MyoAAV2A 36.2–37% (DNA), 83.2% (RNA)
Suya Wang, 2020 [60] TAZ Gene replacement AAV9 N/A (protein restored)
Takahiko Nishiyama, 2022 [61] RBM20 ABEmax-VRQR-SpCas9 AAV9 19% (DNA), 66% (RNA)
Tanja Rothgangl, 2021 [62] PCSK9 ABEmax LNP 58% (mice), 35–40% (NHPs)
Xiao Wang, 2017 [63] PCSK9 CRISPR-Cas9 Adenovirus 40-70 indels (liver)
Xiaolu Pan, 2018 [64] RYR2 SaCas9 AAV9 11.3% (DNA), 21.1% (RNA)
Xin Guo, 2017 [65] LDLR CRISPR-Cas9 Microinjection N/A (knockout confirmed)
Yiwen Zha, 2021 [66] APOC3 CRISPR-Cas9 Microinjection N/A (knockout confirmed)
Yu Zhang, 2020 [67] DMD CRISPR-Cas9 Dual AAV 50–100% (tissue-dependent)
Yuanbojiao Zuo, 2023 [68] ANGPTL3 CRISPR-Cas9 Dual AAV9 63.3% (DNA), 88% (RNA)
Zhanzhao Liu, 2025 [69] CAMK2d Adenine Base Editors AAV9 Not mention
Zhiquan Liu, 2021 [70] PCSK9/TYR/MSTN SpaCas9 AAV8 16.6% (Pcsk9), 40–78% (zygotes)

Therapeutic outcomes

Despite varying editing efficiencies, all studies reported beneficial therapeutic outcomes in their respective disease models. In hyperlipidemia studies, targeting genes such as PCSK9, LDLR, and ANGPTL3 consistently resulted in significant reductions in serum cholesterol levels [14,18,19,27]. In cardiomyopathy models (both hypertrophic and dilated), gene editing led to improved cardiac function, such as increased ejection fraction or reduced myocardial fibrosis, translating to better heart performance [20,21,26]. In the Duchenne muscular dystrophy models, reintroducing dystrophin via gene editing improved muscle strength and function [22,37,67]. Arrhythmia models (Long QT syndrome [17], atrial fibrillation [24], catecholaminergic polymorphic VT [64]) presented correction of electrical abnormalities, evidenced by normalized ECG parameters or fewer arrhythmic episodes.

Metabolic disease models like hereditary tyrosinemia type I showed restoration of metabolic function and survival [25]. Likewise, the transthyretin amyloidosis model demonstrated reduced pathogenic TTR protein deposition [32]. Importantly, many of these therapeutic benefits were the direct result of the gene editing event – for example, base editing of PCSK9 in primates led to durable cholesterol lowering, and editing ANGPTL3 in mice halved triglyceride levels, highlighting the potential clinical impact [14,31].

Notably, even modest editing levels were effective in some disease models; for example, ~ 5–6% dystrophin restoration in Duchenne muscular dystrophy was sufficient to produce functional benefit [22]. These findings underscore that therapeutic impact is not always directly proportional to editing efficiency, especially in models with low correction thresholds.

Recent findings by Feng et al. (2024) identified MST1R as a novel gene associated with Tetralogy of Fallot, demonstrating that its loss impairs cardiomyocyte differentiation and contractile function. These results highlight MST1R as a promising therapeutic target for gene editing-based treatment of congenital heart disease [71] (Table 3).

Table 3. Gene targets and therapeutic outcomes.

Gene Associated Disease Editing Strategy Efficiency Range
ANGPTL3 Hypertriglyceridemia CRISPR-KO, ABE 40–75% (DNA/RNA)
APOC3 Hyperlipidemia CRISPR-KO 50% (Protein)
CAMK2D Heart Failure ABE 7.5–85.7% (RNA/DNA)
DMD Duchenne Muscular Dystrophy Exon Skipping, Frame Restoration 5–50% (Protein)
LDLR Atherosclerosis, Hyperlipidemia CRISPR-HDR, NHEJ, Base Editing 30–70% (DNA)
MYH6/7 Hypertrophic Cardiomyopathy (HCM) ABE, CRISPR Correction 20–80% (RNA/DNA)
NPC1 Niemann-Pick Type C ABE, CBE 21–38% (DNA)
PCSK9 Hypercholesterolemia CRISPR-KO, ABE, Meganuclease 25–85% (DNA/RNA)
PLN Cardiomyopathy/Arrhythmia CRISPR-KO 72% (DNA)
RBM20 Dilated Cardiomyopathy (DCM) ABE 19–71% (RNA/DNA)
RYR2 CPVT (Arrhythmia) CRISPR-KO 11–21% (DNA/RNA)
SCN5A Long QT Syndrome ABE 43–99% (RNA/DNA)
TAZ Barth Syndrome Gene Replacement ~70% (Protein)
TTN Dilated Cardiomyopathy Splicing Rescue (via RBM20 editing) 50% (RNA)
TTR Amyloidosis CRISPR-KO ~70% (DNA)

Safety and off-target effects

Gene editing therapies showed a favorable safety profile in animal models. Many studies used genome-wide analyses to assess off-target effects, with at least 13 reporting no detectable off-target edits, particularly when high-fidelity or base editors were used. Base editing demonstrated superior precision – for example, no off-target mutations or chromosomal translocations were observed in a humanized PCSK9 model, in contrast to low-frequency off-target events and structural variants with standard CRISPR-Cas9 [18].

Among studies reporting off-target analyses (30 studies), detected edits were typically rare and located in non-coding regions, with no cases severe enough to negate therapeutic benefits. GUIDE-seq identified 2–5 off-target sites per guide in Cas9 systems [18], and AAV integration at cut sites was noted in up to 30% of cases [48]. Base editors had < 1% off-target activity, with occasional bystander edits reported [62].

Toxicity assessments revealed no significant adverse effects. Histological analyses of major organs showed no abnormal inflammation or damage, and liver enzyme levels and immune markers remained within normal ranges. No long-term malignancies or severe outcomes were reported (Table 4).

Table 4. Toxicity profiles.

Gene Editing Tool Delivery Method Key Toxicity Risks Incidence Notable Genes
Base Editors (CBE/ABE) AAV vectors or lipid nanoparticles (mRNA + gRNA) Minimal off-target edits (DNA or RNA base changes); occasional transient hepatotoxicity (mild ALT/AST elevations); mild immune activation (e.g., cytokines) ~30% studies PCSK9, ANGPTL3, LDLR, LMNA, MYBPC3, MYH6, MYH7, RBM20, SCN5A, DNMT1, NPC1, CAMK2D
CRISPR-Cas9 (DNA nuclease) AAV vectors (most common); also Cas9 RNP or mRNA (e.g., zygote injection) Off-target indel mutations; on-target large deletions/rearrangements; liver injury (elevated ALT/AST); immune responses (transient cytokine release); AAV vector genome integration at cut sites ~40% studies PCSK9, LDLR, ANGPTL3, APOB, APOA1, APOE, APOC3, CRT, DMD, PLN, PTEN, RYR2, TTR, TYR
CRISPR-Cas10 AAV vectors Mild immune response to vector (e.g., low anti-AAV immunity); no significant off-target mutations or organ damage observed 1 study DMD
CRISPR-Cas13 (RNA targeting) Viral vectors (e.g., AAV) or plasmid delivery Collateral RNA cleavage (off-target transcript degradation) – generally minimal with optimized Cas13; no overt organ toxicity reported in vivo 50% studies MYH6, MEIS1, HOXB13, MHRT
Meganucleases (e.g., I-CreI variants) AAV vectors (e.g., AAV8) Off-target cleavage at unintended sites; liver enzyme elevations (transient liver injury); immune responses (anti-capsid or anti-nuclease T-cell response) 2 studies PCSK9

Randomization and blinding

Attention to bias reduction in study design was variable. Randomization of animals into treatment versus control groups was reported in 16 out of 57 studies (28%). Blinding of investigators to group allocation during outcome assessment was reported in 20 studies (35%). Notably, 10 studies (17.5%) explicitly stated that they implemented both randomization and blinding in their experimental design. Many studies neither mentioned nor clarified these measures, indicating a need for improved methodological rigor in preclinical gene therapy research.

More detailed information about the included studies is provided in Table S1, Supplemental Materials.

Discussion

The development of gene editing systems

Gene editing technologies have evolved significantly over recent decades, progressing from early tools such as zinc-finger nucleases (ZFNs) and transcription activator-like effector nucleases (TALENs), which induce double-strand breaks (DSBs) at specific genomic loci, to more advanced and precise systems (Fig 3).

Fig 3. Milestones of genome editing technology.

Fig 3

Zinc finger nucleases (ZFNs) employ engineered zinc finger domains that recognize DNA triplets and are coupled to FokI nucleases [72]. TALENs, on the other hand, utilize transcription activator-like effector proteins, each recognizing a single nucleotide, also linked to FokI nucleases [73,74]. This one-to-one recognition allows for more straightforward and precise targeting compared to ZFNs [75,76]. However, these methods were complex to design and required extensive protein engineering, limiting their widespread application [77].

The introduction of the CRISPR-Cas9 system has revolutionized gene editing by providing a more accessible, efficient, and versatile approach. CRISPR-Cas9, originally discovered as an adaptive immune mechanism in bacteria, was repurposed in 2012–2013 as a programmable gene editing system [78]. This platform employs a single-guide RNA (sgRNA) to direct the Cas9 nuclease precisely to complementary DNA sequences, thereby generating site-specific DSBs, followed by repair primarily via non-homologous end joining (NHEJ) or homology-directed repair (HDR) [79]. NHEJ often introduces disruptive insertions or deletions, useful for gene knockout studies like PCSK9 deletion for cholesterol reduction [18]. HDR enables precise mutation correction when a repair template is available, though it remains inefficient in vivo and is limited to dividing cells [80]. A critical consideration in CRISPR-Cas9 design is the requirement for a protospacer adjacent motif (PAM) near the target sequence, which can also contribute to off-target activity [81].

To overcome the limitations of CRISPR-Cas9, derivative technologies like base editing were developed. Base editors combine catalytically impaired Cas enzymes with nucleotide-modifying enzymes to enable precise single-base conversions without inducing double-strand breaks [82]. The main types – cytosine base editors (CBEs) and adenine base editors (ABEs) – are especially useful for correcting point mutations in monogenic diseases such as hypertrophic cardiomyopathy (HCM). For instance, Reichart et al. (2023) used ABEs to correct the MYH7 R403Q mutation in an HCM mouse model with over 70% efficiency in cardiomyocytes and minimal side effects [83]. Base editing can also introduce premature stop codons to inactivate genes like PCSK9 [16]. However, these editors are limited to specific transitions (mainly A → G or C → T), and may cause “bystander editing”, wherein unintended nearby bases within the editing window are modified, requires careful guide RNA design and thorough validation [15]. Their large size (~5–6 kb) also complicates in vivo delivery, often requiring dual-vector systems [84].

Beyond conventional DNA editing, recent advances in CRISPR-based technologies have expanded to include RNA and epigenome editing, offering powerful tools to modulate gene expression without inducing permanent changes to the genome [85]. These systems typically use catalytically inactive Cas13 (dCas13) fused to enzymatic domains such as ADAR2 or APOBEC for A-to-I or C-to-U editing, guided by crRNAs. Additionally, RNA methylation can be modulated by fusing dCas13 with methyltransferases (e.g., METTL3/METTL14) or demethylases (e.g., ALKBH5) to target m6A modifications [86]. RNA editing systems offer transient and reversible modulation of gene expression, reducing the risk of permanent off-target genetic alterations. This property makes RNA-targeted approaches especially suitable for therapeutic or research applications where temporary gene regulation is preferred [87]. Despite these advantages, several challenges remain. Off-target activity, particularly in systems with broad sequence tolerance, continues to pose a challenge. Editing efficiency is also influenced by the sequence and structural context of the target RNA. Furthermore, efficient delivery of these editing components into primary cells and tissues, particularly in vivo, remains a significant technical hurdle [88].

Epigenome editing offers a promising approach by using catalytically inactive Cas9 (dCas9) fused to epigenetic modifiers like transcriptional activators (e.g., VP64, p300) or repressors (e.g., KRAB) to modulate gene expression without altering the DNA sequence [89]. This method enables reversible and tunable control through targeted histone or DNA methylation changes. Transient promoter methylation, known as the “hit-and-run” approach, has demonstrated durable therapeutic effects [90]. While it avoids risks linked to DSBs, off-target gene modulation remains a concern, necessitating stringent specificity testing. Furthermore, the delivery of large fusion proteins requires optimized vectors, often using dual-vector systems akin to those in base editing [58]. Epigenome editing shows potential for silencing harmful genes or activating protective pathways, especially in cardiovascular disease models [91] (Fig 4).

Fig 4. Gene and epigenome editing strategies.

Fig 4

ZFNs, TALENs, and CRISPR-Cas9 create double-stranded breaks repaired by non-homologous end joining or homology-directed repair. Prime editing uses a Cas9 nickase and reverse transcriptase to introduce precise edits without double-strand breaks. Base editors convert specific nucleotides (e.g., C to T, A to G) using deaminase enzymes. Epigenome editing uses dCas9 fused to effector domains to modulate gene expression without changing the DNA sequence.

Therapeutic outcomes

Among the included studies, CRISPR-Cas9 was the most frequently employed gene editing platform, predominantly targeting hyperlipidemia-related genes such as PCSK9, LDLR, and ANGPTL3. While CRISPR-Cas9 offers high efficiency and versatility, its reliance on homology-directed repair (HDR) limits its precision, with reported HDR efficiencies as low as 6.7% for LDLR editing [27]. As an alternative, base editors enable single-nucleotide conversions without inducing double-strand breaks, offering greater precision and reduced risk of off-target effects. In the study by Grosch et al. (2022), base editing systems achieved high editing efficiencies ranging from 70% to 87% [44]. However, their application is restricted to specific types of point mutations and may be less effective in larger animal models. For example, Rothgangl et al. (2021) observed editing efficiencies of 35–40% in macaques, compared to 58% in mice [92]. Less commonly used platforms, such as CRISPR-CasRx and CRISPR-Cas10, were also reported, highlighting the expanding versatility of CRISPR-based technologies [30,39]. The choice of gene editing tool is determined by various factors, such as the specific target gene selection, the intended therapeutic objective, the type of delivery vector, and the characteristics of the animal experimental model. This highlights the importance of adopting context-specific strategies to ensure optimal outcomes.

Target gene selection

Gene therapy targets the organ where the disease-driving gene is predominantly expressed or has its pathological effect. In cardiovascular gene editing, the fundamental strategic decision involves whether to direct the gene editing machinery to the heart itself or to a peripheral organ such as the liver to achieve the intended therapeutic outcome.

The liver plays a central role in the production of lipoproteins and enzymes that influence numerous cardiovascular risk factors. Key genes such as PCSK9, ANGPTL3, and TTR are highly expressed in hepatocytes and contribute to systemic blood traits (cholesterol levels, circulating proteins) that have direct effects on cardiovascular health [93]. In a notable example, Richard G Lee et al (2023) employed single LNP-based infusion of the base editor VERVE-101 in non-human primates resulted in an 83% reduction in circulating PCSK9 protein and a ~ 69% decrease in LDL-C, with effects lasting over a year [51]. Similarly, first in vivo CRISPR clinical trial targeted TTR using lipid nanoparticles (LNPs) to deliver Cas9 to the liver, resulting in an 87% reduction in circulating mutant TTR protein [94]. These examples illustrate a clear rationale: when the pathogenic factor originates from the liver, hepatic editing can confer systemic cardiovascular benefits. Moreover, the liver is an accessible and efficient target for gene delivery due to its high perfusion and natural uptake of LNPs and AAV8 vectors, making it particularly suitable for treating metabolic cardiovascular diseases such as hyperlipidemia and amyloidosis through intravenous administration [95].

In contrast, disorders originating within cardiac tissue, such as inherited cardiomyopathies or arrhythmogenic conditions, require direct gene editing within cardiomyocytes or related cardiac cells [96]. For example, correcting pathogenic mutations like those in the MYH6 gene associated with hypertrophic cardiomyopathy necessitates efficient delivery of gene editing agents specifically to cardiac muscle cells, enabling restoration of normal myocardial function [47]. However, cardiac-targeted gene editing presents distinct delivery challenges when compared to hepatic gene editing. Conventional systemic administration of vectors, such AAVs or LNPs, typically results in predominant hepatic accumulation [97,98]. In addition, the complex, multicellular architecture of cardiac tissue, combined with the low efficiency of HDR in largely post-mitotic cardiomyocytes, presents significant barriers to effective genome editing in the heart [99]. Consequently, efficient myocardial delivery often necessitates the use of specialized approaches, including cardiotropic vector engineering, high-dose systemic administration, or direct intracardiac injection [100].

Therapeutic objectives

Gene editing strategies in cardiovascular disease differ significantly between rare monogenic disorders and common polygenic conditions in terms of urgency, feasibility, and translational path.

Rare diseases (monogenic), such as hypertrophic cardiomyopathy (e.g., MYBPC3, MYH7 mutations), dilated cardiomyopathy (LMNA, RBM20), or inherited arrhythmias (KCNQ1, RYR2), are often caused by single, well-characterized mutations [101]. Gene editing offers high curative potential by directly correcting or silencing the causative variant. Proof-of-concept studies in animal models and patient-derived cells have shown promising results, such as ABE-mediated correction of the MYH7 R403Q mutation preventing HCM in mice [20]. By definition, rare diseases affect a small number of patients; however, they are often prioritized within orphan disease frameworks. Such frameworks can facilitate faster clinical translation owing to the significant unmet medical needs and a regulatory environment typically more accommodating of potential risks, particularly as patients with life-threatening rare diseases may be willing to accept higher risks for potential therapeutic benefits [94]. This initial success has provided important evidence supporting the safety and efficacy of gene editing approaches, thereby facilitating their potential application to a broader range of indications. However, a major challenge in applying gene editing to rare diseases lies in the requirement for mutation-specific designs, which raises concerns regarding cost-effectiveness and scalability. Although certain recurrent mutations occur in specific populations and may support broader therapeutic applications, many mutations are unique to individual families, limiting the generalizability of treatment strategies [102]. Approaches such as targeting shared exons, allele knockouts, or editing mutation “hotspots” are being explored to improve scalability [103].

In contrast, common cardiovascular diseases – such as atherosclerosis, hypertension, and heart failure – are influenced by multiple genes and environmental factors, making direct editing of all contributors unfeasible [104]. Instead, editing efforts focus on single genes with outsized effects. PCSK9, for example, is a validated target; individuals with loss-of-function variants exhibit low LDL levels and reduced cardiovascular risk [105]. Similarly, LPA and ANGPTL3 are being explored for lipid lowering in high-risk patients [106,107]. In the context of common diseases, gene editing must demonstrate clear advantages – such as the potential for a one-time curative treatment – while maintaining an exceptional safety profile, particularly since these interventions may be administered to individuals who are otherwise relatively healthy. Widespread implementation necessitates robust safety data, long-term monitoring, and the development of cost-effective delivery systems [108]. Although these approaches are inherently complex, they hold the potential for substantial public health benefits if key challenges related to safety and scalability can be addressed. Future directions in the field include targeting somatic mutations, such as TET2 in clonal hematopoiesis of indeterminate potential (CHIP), or introducing protective genetic variants, such as APOE2, for disease prevention [109,110]. However, these strategies remain in the early stages of research and development.

Delivery vector

Effective delivery of gene editing payloads is a critical determinant of therapeutic success, as the ability to reach target cells and tissues directly impacts editing efficiency and clinical translation. The selection of gene delivery vectors is strategically guided by several key factors, including the target tissue, the size of the genetic cargo, and the desired duration of gene editor expression. Currently, three main platforms dominate in vivo delivery strategies: adeno-associated viruses (AAVs), adenoviral vectors (AdVs), and lipid nanoparticles (LNPs), each offering distinct advantages and limitations.

AAVs remain the most widely used vectors for cardiovascular gene editing due to their high transduction efficiency and tissue-specific tropism. AAVs enable sustained transgene expression, which is particularly beneficial in post-mitotic tissues like cardiac muscle. Various serotypes exhibit distinct targeting profiles: AAV1 and AAV6 efficiently transduce skeletal muscle, AAV5 targets airway epithelia and the CNS [97], AAV8 is hepatotropic [111], and AAV9 is notable for its ability to cross the vascular endothelium and transduce cardiomyocytes, skeletal muscle, and neurons [112,113]. However, AAVs are limited by a small packaging capacity (~4.7 kb), restricting the delivery of large editors like full-length Cas9 or base editing systems [114]. Strategies such as dual-AAV delivery or the use of compact Cas variants address this issue. Immune responses pose a significant barrier to AAV-based therapies, primarily due to the high prevalence of pre-existing neutralizing antibodies against common AAV serotypes [115]. To overcome these challenges, engineered capsids (e.g., AAV.MYO, MyoAAV2) and surface modifications (e.g., Gal–TAT peptides) have been developed to improve cardiomyocyte specificity, reduce off-target transduction, and enhance overall editing efficiency while minimizing immunogenicity [116,117]. Recent advances have also explored the use of melittin analogs to enhance endosomal escape and transgene expression; notably, the insertion of the p5RHH peptide into the AAV capsid significantly improved transduction efficiency in vitro and in vivo, including in rAAV-resistant cells and liver tissue, highlighting a promising approach to further optimize AAV-mediated delivery [118].

AdVs were used in 3 included studies for CRISPR-Cas9 delivery, achieving high editing efficiency [18,19,50]. AdVs are characterized by their high cargo capacity – up to ~30 kb in helper-dependent (“gutless”) variants – allowing for delivery of large genome editors or entire HDR toolkits within a single vector [119,120]. AdVs also transduce a broad range of dividing and non-dividing cells and do not integrate into the host genome, thereby reducing the risk of insertional mutagenesis. However, their pronounced immunogenicity severely limits their clinical application for in vivo gene editing. First-generation AdVs have been associated with acute immune responses and hepatotoxicity, and most adults carry pre-existing anti-AdV immunity [121]. Strategies to reduce immunogenicity – such as using rare serotypes or capsid shielding – have had limited success [122]. Consequently, AdVs have seen niche use primarily in large-animal models or preclinical studies where transient, high expression and large cargo delivery are essential.

LNPs have emerged as a leading non-viral delivery platform, particularly for liver-directed gene editing. LNPs encapsulate mRNA or ribonucleoprotein (RNP) complexes and are naturally directed to the liver due to interactions with serum proteins. This property has been exploited for editing liver-specific genes like PCSK9 and ANGPTL3 [123]. Musunuru et al. (2021) demonstrated that a single LNP dose achieving about a 60% editing rate of the PCSK9 gene in primate liver led to a ~ 60% reduction in LDL-C, with only a single off-target mutation detected [16]. LNPs are advantageous for their low immunogenicity, enabling repeated administration without eliciting strong immune responses, and their flexible cargo capacity, which can accommodate large mRNA or protein payloads [124].

However, LNPs are generally limited by transient expression, which – while sufficient for permanent genome editing – is a limitation for therapies requiring sustained protein production [125]. Additionally, LNPs typically exhibit strong liver tropism, making extrahepatic delivery (e.g., to the heart or muscle) more challenging [126,127]. Research is now focused on enhancing LNP specificity through targeted modifications, such as N-acetylgalactosamine (GalNAc) conjugation for hepatocyte targeting via the asialoglycoprotein receptor (ASGR), or exploring new formulations capable of efficient delivery to extrahepatic tissues [40,128].

Emerging delivery technologies, such as engineered virus-like particles (eVLPs), represent a novel approach that blends the efficiency of viral vectors with the safety profile of non-viral systems. eVLPs deliver gene editing proteins (e.g., Cas9 or base editors) without viral DNA integration, reducing the risk of insertional mutagenesis. A 2022 study by Banskota et al. showed that intravenous delivery of eVLPs achieved editing in 63% of mouse hepatocytes and reduced hepatic PCSK9 protein by 78%, with minimal off-target effects [53].

Experimental model

Preclinical testing of cardiovascular gene editing spans small animal models (mice, rats), mid-sized models (rabbits, pigs), and non-human primates (usually macaques), each with their own biology. Results can vary widely between species, and these differences have crucial implications for interpreting data and predicting human outcomes. For instance, Rothgangl et al. (2021) reported that delivery of an adenine base editor via LNPs resulted in approximately 35–40% allele editing in the myocardium of non-human primates, whereas comparable strategies in mouse liver models achieved significantly higher efficiencies (~58%) [92].

Small animal models, such as mice and rats, are widely used due to their low cost, short reproductive cycles, and well-mapped genomes. However, key physiological differences – especially in lipid metabolism and cardiovascular function – limit their translational value. Mice primarily transport cholesterol via HDL rather than LDL and require genetic modifications (e.g., ApoE or LDLR knockouts) to model human-like atherosclerosis [129]. Their high heart rates (∼250–500 bpm) and absence of collateral coronary circulation reduce their suitability for ischemia studies [130]. Furthermore, immunological differences are notable, as mice typically lack pre-existing immunity to AAV or Cas9, unlike humans and primates [131].

Mid-sized models, like rabbits and pigs, offer greater physiological relevance. Rabbits develop LDL-driven atherosclerosis on high-cholesterol diets and are well-suited for evaluating lipid-targeting gene therapies [132]. Their size also permits advanced imaging techniques. Pigs closely mimic human cardiovascular anatomy, lipoprotein profiles, and drug metabolism, making them ideal for testing gene therapies for myocardial infarction and arrhythmias. However, gene editing in pigs is technically demanding, often requiring somatic cell nuclear transfer or advanced delivery systems [133].

Non-human primates, particularly macaques, are the most translationally relevant models due to their close genetic and physiological similarity to humans. They accurately replicate human lipid profiles, insulin responses, and cardiovascular regulation, enabling comprehensive evaluation of gene-editing therapies. Yet, their use is limited by ethical concerns, cost, and long lifespans, making them suitable mainly for late-stage preclinical studies where safety and immune responses are critical [134].

In conclusion, while rodent models support early-stage research, translational success requires complementary data from larger animals. Differences in physiology and immunity across species remain key considerations, and regulatory approval often necessitates safety data from NHPs before initiating human trials.

Safety and off-target effects

Safety assessments across the included studies consistently identified transient elevations in liver enzymes as the most commonly observed adverse effect. Notably, off-target gene editing events were minimal, occurring at a frequency of less than 1% in the majority of studies. No life-threatening adverse events were reported, suggesting favorable short-term safety of gene editing interventions in cardiovascular disease model. However, long-term safety remains insufficiently characterized. Key concerns such as immunogenicity following repeated vector administration or the potential for oncogenic transformations arising from off-target genomic alterations highlight the need for extended follow-up, especially since most preclinical studies to date have monitored outcomes for only a few weeks to months post-intervention.

A comprehensive evaluation of safety is critical when translating gene editing therapies to clinical settings, as each component of the therapeutic platform can introduce distinct risks. For instance, the use of bacterial-derived nucleases like Cas9 or Cas12 could trigger immune responses in vivo, both animals and humans may harbor pre-existing antibodies against these proteins. [115,135]. High systemic doses of AAV vectors have been associated with immune-mediated hepatitis in some preclinical and clinical studies, while AdV vectors are well known to induce dose-dependent inflammatory responses [136,137]. LNP-based delivery systems are generally well tolerated, they can trigger transient infusion-related reactions or activate innate immune pathways [126,127].

Editor-specific off-target effects remain a significant concern in the field of gene editing. The CRISPR-Cas9 system, for instance, can occasionally induce unintended double-strand breaks at genomic loci bearing partial sequence homology, potentially resulting in mosaic or undesirable mutations [138]. Likewise, base editors may catalyze bystander nucleotide conversions and have been shown to alter RNA transcripts, thereby introducing unintended genetic modifications [139]. Furthermore, disruption of genes with uncharacterized or broad systemic functions may result in unforeseen phenotypic consequences, while partial correction – where only a subset of target cells is edited – may be insufficient for therapeutic efficacy and could introduce heterogeneity among cell populations [140].

To address these challenges, ongoing innovations are being developed to improve both the safety and specificity of gene editing strategies. Tissue-specific nanoparticles and non-viral delivery methods – such as exosomes and extracellular vesicles – are being investigated as alternatives to conventional viral vectors. MyoAAV, a muscle-specific AAV variant, has shown promise in enhancing targeted gene delivery to cardiac and skeletal muscle tissues, [141]. Meanwhile, next-generation editing tools such as prime editing and high-specificity CRISPR variants (e.g., Cas12, Cas13, Cas14) offer improved precision [142,143]. High-fidelity Cas9 variants, including eSpCas9 and HiFi Cas9, have also demonstrated reduced off-target activity, thereby enhancing safety profiles [144]. Finally, the integration of artificial intelligence and machine learning in gRNA design could enhance targeting precision and minimize off-target effects [145,146].

Future directions: From bench to bedside

Promising outcomes from preclinical models have laid the groundwork for gene editing therapies in human cardiovascular disease. Currently, several clinical trials are underway to evaluate these approaches, particularly those targeting PCSK9 for the treatment of hypercholesterolemia. Among the most advanced candidates is Verve Therapeutics’ VERVE-101, a CRISPR-based therapy targeting the PCSK9 gene, now in Phase 1 clinical trial for familial hypercholesterolemia. Preliminary data indicate substantial reductions in LDL-c levels without significant adverse effects [147]. A related candidate, VERVE-102, employs the same genetic payload as VERVE-101 but utilizes a GalNAc LNP delivery system; it is currently being assessed in the ongoing Phase 1b HEART-2 trial [148]. In addition, Verve is developing VERVE-201, which targets ANGPTL3, offering an alternative therapeutic strategy focused on remnant cholesterol metabolism in patients with refractory hypercholesterolemia. This candidate is also in Phase 1b clinical evaluation [82]. The recent approval by the U.S. Food and Drug Administration (FDA) of Verve’s Investigational New Drug (IND) application has facilitated the expansion of clinical trials within the United States. CRISPR-based therapies utilizing LNP delivery systems have similarly shown substantial promise. AccurEdit Therapeutics’ ART002, for instance, achieved a 50–70% reduction in LDL-c levels in Phase 1 studies, potentially offering superior durability and efficacy compared to RNA interference (RNAi)-based treatments. These single-dose interventions may also overcome long-standing challenges related to patient adherence in lipid-lowering therapies [149].

In the context of cardiac amyloidosis, NTLA-2001 (Nexiguran ziclumeran or nex-z), a CRISPR-Cas9-based gene-editing therapy, demonstrated an 89% reduction in serum transthyretin levels at 28 days and a 90% reduction at 12 months during Phase 1 trials. Clinical outcomes indicated stability or improvement in 92% of patients, accompanied by stable NT-proBNP and troponin levels, and a favorable safety profile characterized by only mild adverse events [150]. Furthermore, Intellia Therapeutics’ NTLA-2001, delivered via LNPs, achieved over 80% TTR knockdown and was associated with improvements in cardiac performance. The therapy has been well tolerated in Phase 2 study, and the ongoing Phase 3 MAGNITUDE trial (NCT06128629) is expected to conclude in 2028 [151]. For inherited cardiomyopathies, AAV-based gene delivery approaches have shown early potential. Tenaya Therapeutics’ TN-201, designed to target MYBPC3 in hypertrophic cardiomyopathy, has demonstrated successful vector delivery and transgene expression in cardiac tissue [152]. Similarly, Regenxbio’s RGX-202, initially developed for Duchenne muscular dystrophy, has shown promising microdystrophin expression and may offer therapeutic benefits for the associated cardiomyopathy [153] (Table 5).

Table 5. Ongoing clinical trials in gene therapy of CVD. From the American Heart Association Advisory [154].

Trial ID Start Year Disease/
Condition
Study Design Target Gene/Protein Therapy Name Delivery Method Current Trial Phase
Genetic Cardiomyopathy
NCT05885412 2023 Arrhythmogenic Cardiomyopathy (ACM) Open Label
Multi center
PKP2 RP-A601 AAV Phase 1
NCT06109181 2024 ACM Open Label
Multi center
PKP2 LX2020 AAV Phase 1/2
NCT06228924 2024 ACM Open Label
Multi center
PKP2 TN-401 AAV Phase 1
NCT05836259 2023 Hypertrophic Cardiomyopathy (HCM) Open Label
Multi center
MYBPC3 TN-201 AAV Phase 1b
Heart Failure
NCT05598333 2023 Ischemic Cardiomyopathy & Heart Failure Double-blinded
Multi center
PP1 AB-1002 AAV Phase 2
Hyperlipidemia
NCT06125847 2023 FH Open-label Single-center LDLR NGGT006 AAV Phase 1
NCT00891306 2009 FH Open Label
Multi center
LDLR LPLS447X AAV Phase 2/3
NCT06293729 2024 FH Open-label Single-center LDLR NGGT006 AAV Phase 1
NCT06112327 2024 FH Long-term follow-up PCSK9 VERVE-101 LNP Phase 1
NCT05860569 2024 Hypertriglyceridemia Open Label
Multi center
LPL GC304 AAV Phase 1
Genetic Syndromes
NCT04601051 2020 Transthyretin Amyloidosis Open Label
Multi center
TTR NTLA-2001 LNP Phase 1
NCT05445323 2022 Friedreich’s Ataxia Open Label
Multi center
FXN LX2006 AAV Phase 1/2
NCT05302271 2022 Friedreich’s Ataxia Open-label Single-center FXN AAVrh.10hFXN AAV Phase 1a
NCT04174105 2020 Pompe Disease Open Label
Multi center
GAA AT845 AAV Phase 1
NCT03533673 2018 Pompe Disease Open-label Single-center GAA ACTUS-101 AAV Phase 1/2
NCT04093349 2020 Pompe Disease Open Label
Multi center
GAA SPK-3006 AAV Phase 1/2
NCT00976352 2010 Pompe Disease Open-label Single-center GAA AAV-GAA AAV Phase 1/2
NCT02240407 2017 Pompe Disease Double-blinded
Single-center
GAA AAV-GAA AAV Phase 1
NCT04046224 2019 Fabry Disease Open Label
Multi center
GLA ST-920 AAV Phase 1/2
NCT04519749 2020 Fabry Disease Open Label
Multi center
GLA 4D-310 AAV Phase 1/2
NCT06092034 2023 Danon Disease Open Label
Multi center
LAMP2 RP-A501 AAV Phase 2

Ethical considerations

The clinical implementation of gene editing therapies for CVDs must be guided by careful ethical oversight and comprehensive regulatory frameworks. As these interventions permanently alter the genome, there is a ethical obligation to ensure that potential benefits justify the risks and that unintended consequences are minimized. A central ethical imperative is to maintain public trust. To this end, the medical and scientific communities must maintain transparency regarding both the known risks – such as off-target effects and immune responses – and the uncertainties, including potential long-term outcomes. Active and ongoing engagement with patients and the broader public is essential to foster informed understanding and acceptance of these emerging therapies [155].

Public sensitivity to gene editing has been heightened by controversial events, such as the unethical germline genome editing of human embryos reported in 2018, which underscored the need to clearly distinguish therapeutic somatic gene editing from heritable germline modifications. International consensus statements, including the National Academy of Sciences 2017 report, have affirmed that somatic gene editing may be ethically permissible under stringent regulatory oversight, whereas germline editing remains widely prohibited across jurisdictions [156]. Researchers and clinicians bear the responsibility to adhere to established ethical guidelines and regulatory standards. This includes obtaining comprehensive informed consent, which must explicitly communicate the irreversible nature of gene editing procedures and the necessity for long-term, potentially lifelong, clinical monitoring of individuals who receive such therapies.

Equitable access and justice considerations also arise as gene editing therapies move toward clinical application. Perhaps the most pressing challenges is the cost. For example, the recently approved gene therapy for sickle cell disease, Casgevy, has a reported price of $2 million, raising serious questions about equitable access and reimbursement. This is especially concerning for chronic conditions such as CVDs, which affect large, diverse patient populations. It is a moral imperative to ensure that life-saving gene editing interventions are not limited to a socioeconomically privileged minority. Policies and funding mechanisms must be developed to promote broader accessibility and prevent the exacerbation of existing healthcare disparities.

Regulatory authorities will also need to address how to ethically design early human trials – for example, selecting appropriate patients (those with no remaining conventional treatment options) and balancing risk-benefit in life-threatening versus less severe conditions. Furthermore, the long-term safety and durability of gene editing therapies remain incompletely understood and warrant sustained investigation [157]. While preclinical studies and early-phase trials have shown promising results, the potential for delayed adverse effects, such as immune responses or off-target mutations, necessitates long-term monitoring of patients [158]. The establishment of long-term patient registries will likely be essential to track clinical outcomes and identify any late-emerging complications, ensuring continuous data collection beyond the confines of initial trials. Moreover, as with any transformative biomedical technology, the ethical governance of gene editing must be dynamic and responsive. This includes ongoing ethical review processes, periodic reassessment of regulatory frameworks in light of emerging scientific evidence or evolving societal values, and active involvement of diverse stakeholders – including ethicists, patient advocacy groups, clinicians, and policymakers – in guiding the responsible development of these therapies.

Conclusion

This study highlights the tremendous potential of gene editing therapies for treating CVDs. The high editing efficiencies, significant therapeutic outcomes, and favorable safety profiles observed in animal models provide a strong rationale for advancing these therapies to clinical trials. Notably, unlike conventional drugs or interventions that require ongoing treatment to control disease symptoms, gene editing offers the possibility of a one-time, curative intervention by directly correcting the underlying genetic defect. However, challenges related to delivery, long-term safety, and scalability must be addressed to fully realize the potential of gene editing in cardiovascular medicine. With continued innovation and rigorous preclinical and clinical evaluation, gene editing therapies could revolutionize the treatment of CVDs, offering hope for patients with currently untreatable conditions.

Supporting information

S1 File. Supplemental materials.

(DOCX)

pone.0325330.s001.docx (42KB, docx)
S2 File. PRISMA checklist.

(DOCX)

pone.0325330.s002.docx (190.5KB, docx)

Acknowledgments

Fig 4 was created using BioRender (https://www.biorender.com).

Abbreviations

AAV

adeno-associated viruses

ABE

Adenine base editor

AdV

Adenoviral vector

ALT

Alanin aminotransferase

ANGPTL3

Angiopoietin‐like protein 3

ARRIVE

Animal Research: Reporting of In Vivo Experiments

ASGR

asialoglycoprotein receptor

AST

Aspartat aminotransferase

BE

Base editors

CRISPR-Cas9

Clustered Regularly Interspaced Short Palindromic Repeats-associated protein 9

CVD

Cardiovascular diseases

FH

Familial hypercholesterolemia

gRNA

guide RNA

HDR

homology-directed repair

LDL-c

Low density lipoprotein cholesterol

LDLR

Low density lipoprotein receptor

MeSH

Medical Subject Headings

NHEJ

non-homologous end joining

PAM

Protospacer adjacent motif

PRISMA

Preferred Reporting Items for Systematic Reviews and Meta-Analyses

PSCK9

Proprotein convertase subtilisin/kexin type 9

TALEN

Transcription activator-like effector nuclease

TTR

Transthyretin

ZFN

Zinc-finger nuclease

Data Availability

All relevant data are within the manuscript and its Supporting Information files.

Funding Statement

The author(s) received no specific funding for this work.

References

  • 1.Ma L, Chen W, Gao R, Liu L, Zhu M, Wang Y. China cardiovascular diseases report 2018: an updated summary. J Geriatr Cardiol. 2020;17(1):1–8. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 2.Martin S, Aday A, Almarzooq Z, Anderson C, Arora P, Avery C. 2024 heart disease and stroke statistics: a report of US and global data from the American Heart Association. Circ. 2024;149(8):e347–913. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 3.Roth GA, Mensah GA, Johnson CO, Addolorato G, Ammirati E, Baddour LM, et al. Global burden of cardiovascular diseases and risk factors, 1990-2019: update from the GBD 2019 study. J Am Coll Cardiol. 2020;76(25):2982–3021. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 4.Vrablik M, Dlouha D, Todorovova V, Stefler D, Hubacek JA. Genetics of cardiovascular disease: how far are we from personalized CVD risk prediction and management?. Int J Mol Sci. 2021;22(8). [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 5.Zubielienė K, Valterytė G, Jonaitienė N, Žaliaduonytė D, Zabiela V. Familial Hypercholesterolemia and Its Current Diagnostics and Treatment Possibilities: A Literature Analysis. Medicina (Kaunas). 2022;58(11):1665. doi: 10.3390/medicina58111665 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 6.Leopold JA, Loscalzo J. Emerging role of precision medicine in cardiovascular disease. Circ Res. 2018;122(9):1302–15. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 7.Grisorio L, Bongianino R, Gianeselli M, Priori SG. Gene therapy for cardiac diseases: methods, challenges, and future directions. Cardiovasc Res. 2024;120(14):1664–82. doi: 10.1093/cvr/cvae207 [DOI] [PubMed] [Google Scholar]
  • 8.Malech HL, Garabedian EK, Hsieh MM. Evolution of gene therapy, historical perspective. Hematol Oncol Clin North Am. 2022;36(4):627–45. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 9.Wang D, Tai P, Gao G. Adeno-associated virus vector as a platform for gene therapy delivery. Nat Rev Drug Discov. 2019;18(5):358–78. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 10.Abdelnour SA, Xie L, Hassanin AA, Zuo E, Lu Y. The Potential of CRISPR/Cas9 Gene Editing as a Treatment Strategy for Inherited Diseases. Front Cell Dev Biol. 2021;9:699597. doi: 10.3389/fcell.2021.699597 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 11.Han H, Yang Y, Jiao Y, Qi H, Han Z, Wang L. Leverage of nuclease-deficient CasX for preventing pathological angiogenesis. Mol Ther Nucleic Acids. 2023;33:738–48. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 12.Page M, McKenzie J, Bossuyt P, Boutron I, Hoffmann T, Mulrow C. The PRISMA 2020 statement: an updated guideline for reporting systematic reviews. Int J Surg. 2021;88:105906. [DOI] [PubMed] [Google Scholar]
  • 13.Kilkenny C, Browne W, Cuthill IC, Emerson M, Altman DG, NC3Rs Reporting Guidelines Working Group. Animal research: reporting in vivo experiments: the ARRIVE guidelines. Br J Pharmacol. 2010;160(7):1577–9. doi: 10.1111/j.1476-5381.2010.00872.x [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 14.Breton C, Furmanak T, Avitto AN, Smith MK, Latshaw C, Yan H, et al. Increasing the Specificity of AAV-Based Gene Editing through Self-Targeting and Short-Promoter Strategies. Mol Ther. 2021;29(3):1047–56. doi: 10.1016/j.ymthe.2020.12.028 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 15.Reichart D, Newby GA, Wakimoto H, Lun M, Gorham JM, Curran JJ, et al. Efficient in vivo genome editing prevents hypertrophic cardiomyopathy in mice. Nat Med. 2023;29(2):412–21. doi: 10.1038/s41591-022-02190-7 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 16.Musunuru K, Chadwick AC, Mizoguchi T, Garcia SP, DeNizio JE, Reiss CW, et al. In vivo CRISPR base editing of PCSK9 durably lowers cholesterol in primates. Nature. 2021;593(7859):429–34. doi: 10.1038/s41586-021-03534-y [DOI] [PubMed] [Google Scholar]
  • 17.Qi M, Ma S, Liu J, Liu X, Wei J, Lu W-J, et al. In Vivo Base Editing of Scn5a Rescues Type 3 Long QT Syndrome in Mice. Circulation. 2024;149(4):317–29. doi: 10.1161/circulationaha.123.065624 [DOI] [PubMed] [Google Scholar]
  • 18.Carreras A, Pane LS, Nitsch R, Madeyski-Bengtson K, Porritt M, Akcakaya P, et al. In vivo genome and base editing of a human PCSK9 knock-in hypercholesterolemic mouse model. BMC Biol. 2019;17(1):4. doi: 10.1186/s12915-018-0624-2 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 19.Chadwick AC, Evitt NH, Lv W, Musunuru K. Reduced Blood Lipid Levels With In Vivo CRISPR-Cas9 Base Editing of ANGPTL3. Circulation. 2018;137(9):975–7. doi: 10.1161/CIRCULATIONAHA.117.031335 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 20.Chai AC, Cui M, Chemello F, Li H, Chen K, Tan W, et al. Base editing correction of hypertrophic cardiomyopathy in human cardiomyocytes and humanized mice. Nat Med. 2023;29(2):401–11. doi: 10.1038/s41591-022-02176-5 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 21.Li B, Guo Y, Zhan Y, Zhou X, Li Y, Zhao C, et al. Cardiac Overexpression of XIN Prevents Dilated Cardiomyopathy Caused by TNNT2 ΔK210 Mutation. Front Cell Dev Biol. 2021;9:691749. doi: 10.3389/fcell.2021.691749 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 22.Long C, Amoasii L, Mireault AA, McAnally JR, Li H, Sanchez-Ortiz E, et al. Postnatal genome editing partially restores dystrophin expression in a mouse model of muscular dystrophy. Science. 2016;351(6271):400–3. doi: 10.1126/science.aad5725 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 23.Ran FA, Cong L, Yan WX, Scott DA, Gootenberg JS, Kriz AJ, et al. In vivo genome editing using Staphylococcus aureus Cas9. Nature. 2015;520(7546):186–91. doi: 10.1038/nature14299 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 24.Hu H, Wang L, Li H, Li H, Chen X, Peng W, et al. Long-term amelioration of an early-onset familial atrial fibrillation model with AAV-mediated in vivo gene therapy. Fundam Res. 2022;2(6):829–35. doi: 10.1016/j.fmre.2022.05.002 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 25.Yin H, Song C-Q, Suresh S, Wu Q, Walsh S, Rhym LH, et al. Structure-guided chemical modification of guide RNA enables potent non-viral in vivo genome editing. Nat Biotechnol. 2017;35(12):1179–87. doi: 10.1038/nbt.4005 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 26.Du H, Zhao Y, Wen J, Dai B, Hu G, Zhou Y, et al. LncRNA DCRT Protects Against Dilated Cardiomyopathy by Preventing NDUFS2 Alternative Splicing by Binding to PTBP1. Circulation. 2024;150(13):1030–49. doi: 10.1161/CIRCULATIONAHA.123.067861 [DOI] [PubMed] [Google Scholar]
  • 27.Zhao H, Li Y, He L, Pu W, Yu W, Li Y, et al. In Vivo AAV-CRISPR/Cas9-Mediated Gene Editing Ameliorates Atherosclerosis in Familial Hypercholesterolemia. Circulation. 2020;141(1):67–79. doi: 10.1161/CIRCULATIONAHA.119.042476 [DOI] [PubMed] [Google Scholar]
  • 28.Dave J, Raad N, Mittal N, Zhang L, Fargnoli A, Oh JG, et al. Gene editing reverses arrhythmia susceptibility in humanized PLN-R14del mice: modelling a European cardiomyopathy with global impact. Cardiovasc Res. 2022;118(15):3140–50. doi: 10.1093/cvr/cvac021 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 29.Davis J, Wang X, Witte I, Huang T, Levy J, Raguram A. Efficient in vivo base editing via single adeno-associated viruses with size-optimized genomes encoding compact adenine base editors. Nat Biomed Eng. 2022;6(11):1272–83. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 30.Li J, Zhu D, Hu S, Nie Y. Crispr-casrx knock-in mice for rna degradation. Sci China Life Sci. 2022;65(11):2248–56. [DOI] [PubMed] [Google Scholar]
  • 31.Gong J, Wang H-X, Lao Y-H, Hu H, Vatan N, Guo J, et al. A Versatile Nonviral Delivery System for Multiplex Gene-Editing in the Liver. Adv Mater. 2020;32(46):e2003537. doi: 10.1002/adma.202003537 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 32.Finn J, Smith A, Patel M, Shaw L, Youniss M, van Heteren J. A single administration of CRISPR/Cas9 lipid nanoparticles achieves robust and persistent in vivo genome editing. Cell Rep. 2018;22(9):2227–35. [DOI] [PubMed] [Google Scholar]
  • 33.Levy JM, Yeh W-H, Pendse N, Davis JR, Hennessey E, Butcher R, et al. Cytosine and adenine base editing of the brain, liver, retina, heart and skeletal muscle of mice via adeno-associated viruses. Nat Biomed Eng. 2020;4(1):97–110. doi: 10.1038/s41551-019-0501-5 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 34.Jarrett KE, Lee CM, Yeh Y-H, Hsu RH, Gupta R, Zhang M, et al. Somatic genome editing with CRISPR/Cas9 generates and corrects a metabolic disease. Sci Rep. 2017;7:44624. doi: 10.1038/srep44624 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 35.Jarrett KE, Lee C, De Giorgi M, Hurley A, Gillard BK, Doerfler AM, et al. Somatic Editing of Ldlr With Adeno-Associated Viral-CRISPR Is an Efficient Tool for Atherosclerosis Research. Arterioscler Thromb Vasc Biol. 2018;38(9):1997–2006. doi: 10.1161/ATVBAHA.118.311221 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 36.Huang L, Hua Z, Xiao H, Cheng Y, Xu K, Gao Q, et al. CRISPR/Cas9-mediated ApoE-/- and LDLR-/- double gene knockout in pigs elevates serum LDL-C and TC levels. Oncotarget. 2017;8(23):37751–60. doi: 10.18632/oncotarget.17154 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 37.Xu L, Lau YS, Gao Y, Li H, Han R. Life-Long AAV-Mediated CRISPR Genome Editing in Dystrophic Heart Improves Cardiomyopathy without Causing Serious Lesions in mdx Mice. Mol Ther. 2019;27(8):1407–14. doi: 10.1016/j.ymthe.2019.05.001 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 38.Wang L, Breton C, Warzecha CC, Bell P, Yan H, He Z, et al. Long-term stable reduction of low-density lipoprotein in nonhuman primates following in vivo genome editing of PCSK9. Mol Ther. 2021;29(6):2019–29. [DOI] [PMC free article] [PubMed]
  • 39.Zhang L, Wang L, Xie Y, Wang P, Deng S, Qin A. Triple-targeting delivery of crispr/cas9 to reduce the risk of cardiovascular diseases. Angew Chem Int Ed Engl. 2019;58(36):12404–8. [DOI] [PubMed] [Google Scholar]
  • 40.Kasiewicz LN, Biswas S, Beach A, Ren H, Dutta C, Mazzola AM, et al. GalNAc-Lipid nanoparticles enable non-LDLR dependent hepatic delivery of a CRISPR base editing therapy. Nat Commun. 2023;14(1):2776. doi: 10.1038/s41467-023-37465-1 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 41.Yang L, Liu Z, Chen G, Chen Z, Guo C, Ji X, et al. MicroRNA-122-Mediated Liver Detargeting Enhances the Tissue Specificity of Cardiac Genome Editing. Circulation. 2024;149(22):1778–81. doi: 10.1161/CIRCULATIONAHA.123.065438 [DOI] [PubMed] [Google Scholar]
  • 42.Yang L, Liu Z, Sun J, Chen Z, Gao F, Guo Y. Adenine base editor-based correction of the cardiac pathogenic Lmna c.1621C > T mutation in murine hearts. J Cell Mol Med. 2024;28(4):e18145. doi: 10.1111/jcmm.18145 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 43.De Giorgi M, Li A, Hurley A, Barzi M, Doerfler AM, Cherayil NA, et al. Targeting the Apoa1 locus for liver-directed gene therapy. Mol Ther Methods Clin Dev. 2021;21:656–69. doi: 10.1016/j.omtm.2021.04.011 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 44.Grosch M, Schraft L, Chan A, Küchenhoff L, Rapti K, Ferreira A-M, et al. Striated muscle-specific base editing enables correction of mutations causing dilated cardiomyopathy. Nat Commun. 2023;14(1):3714. doi: 10.1038/s41467-023-39352-1 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 45.Guo M, Xu Y, Dong Z, Zhou Z, Cong N, Gao M, et al. Inactivation of ApoC3 by CRISPR/Cas9 Protects Against Atherosclerosis in Hamsters. Circ Res. 2020;127(11):1456–8. doi: 10.1161/CIRCRESAHA.120.317686 [DOI] [PubMed] [Google Scholar]
  • 46.Qiu M, Glass Z, Chen J, Haas M, Jin X, Zhao X. Lipid nanoparticle-mediated codelivery of Cas9 mRNA and single-guide RNA achieves liver-specific in vivo genome editing of Angptl3. Proc Natl Acad Sci U S A. 2021;118(10). [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 47.Yang P, Lou Y, Geng Z, Guo Z, Wu S, Li Y, et al. Allele-Specific Suppression of Variant MHC With High-Precision RNA Nuclease CRISPR-Cas13d Prevents Hypertrophic Cardiomyopathy. Circulation. 2024;150(4):283–98. doi: 10.1161/CIRCULATIONAHA.123.067890 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 48.Li Q, Su J, Liu Y, Jin X, Zhong X, Mo L, et al. In vivo PCSK9 gene editing using an all-in-one self-cleavage AAV-CRISPR system. Mol Ther Methods Clin Dev. 2021;20:652–9. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 49.Cheng Q, Wei T, Farbiak L, Johnson LT, Dilliard SA, Siegwart DJ. Selective organ targeting (SORT) nanoparticles for tissue-specific mRNA delivery and CRISPR-Cas gene editing. Nat Nanotechnol. 2020;15(4):313–20. doi: 10.1038/s41565-020-0669-6 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 50.Ding Q, Strong A, Patel KM, Ng S-L, Gosis BS, Regan SN, et al. Permanent alteration of PCSK9 with in vivo CRISPR-Cas9 genome editing. Circ Res. 2014;115(5):488–92. doi: 10.1161/CIRCRESAHA.115.304351 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 51.Lee RG, Mazzola AM, Braun MC, Platt C, Vafai SB, Kathiresan S, et al. Efficacy and Safety of an Investigational Single-Course CRISPR Base-Editing Therapy Targeting PCSK9 in Nonhuman Primate and Mouse Models. Circulation. 2023;147(3):242–53. doi: 10.1161/CIRCULATIONAHA.122.062132 [DOI] [PubMed] [Google Scholar]
  • 52.Lu R, Yuan T, Wang Y, Zhang T, Yuan Y, Wu D, et al. Spontaneous severe hypercholesterolemia and atherosclerosis lesions in rabbits with deficiency of low-density lipoprotein receptor (LDLR) on exon 7. EBioMedicine. 2018;36:29–38. doi: 10.1016/j.ebiom.2018.09.020 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 53.Banskota S, Raguram A, Suh S, Du SW, Davis JR, Choi EH, et al. Engineered virus-like particles for efficient in vivo delivery of therapeutic proteins. Cell. 2022;185(2):250–65.e16. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 54.Liu S, Li K, Wagner Florencio L, Tang L, Heallen TR, Leach JP. Gene therapy knockdown of hippo signaling induces cardiomyocyte renewal in pigs after myocardial infarction. Sci Transl Med. 2021;13(600). [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 55.Ma S, Jiang W, Liu X, Lu W-J, Qi T, Wei J, et al. Efficient Correction of a Hypertrophic Cardiomyopathy Mutation by ABEmax-NG. Circ Res. 2021;129(10):895–908. doi: 10.1161/CIRCRESAHA.120.318674 [DOI] [PubMed] [Google Scholar]
  • 56.Wu S, Yang P, Geng Z, Li Y, Guo Z, Lou Y, et al. Base editing effectively prevents early-onset severe cardiomyopathy in Mybpc3 mutant mice. Cell Res. 2024;34(4):327–30. doi: 10.1038/s41422-024-00930-7 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 57.Lebek S, Caravia XM, Chemello F, Tan W, McAnally JR, Chen K, et al. Elimination of CaMKIIδ Autophosphorylation by CRISPR-Cas9 Base Editing Improves Survival and Cardiac Function in Heart Failure in Mice. Circulation. 2023;148(19):1490–504. doi: 10.1161/CIRCULATIONAHA.123.065117 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 58.Lebek S, Chemello F, Caravia XM, Tan W, Li H, Chen K, et al. Ablation of CaMKIIδ oxidation by CRISPR-Cas9 base editing as a therapy for cardiac disease. Science. 2023;379(6628):179–85. doi: 10.1126/science.ade1105 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 59.Lebek S, Caravia X, Straub L, Alzhanov D, Tan W, Li H. Crispr-cas9 base editing of pathogenic camkiiδ improves cardiac function in a humanized mouse model. J Clin Invest. 2024;134(1). [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 60.Wang S, Li Y, Xu Y, Ma Q, Lin Z, Schlame M, et al. AAV Gene Therapy Prevents and Reverses Heart Failure in a Murine Knockout Model of Barth Syndrome. Circ Res. 2020;126(8):1024–39. doi: 10.1161/CIRCRESAHA.119.315956 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 61.Nishiyama T, Zhang Y, Cui M, Li H, Sanchez-Ortiz E, McAnally JR, et al. Precise genomic editing of pathogenic mutations in RBM20 rescues dilated cardiomyopathy. Sci Transl Med. 2022;14(672):eade1633. doi: 10.1126/scitranslmed.ade1633 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 62.Rothgangl T, Dennis MK, Lin PJC, Oka R, Witzigmann D, Villiger L, et al. In vivo adenine base editing of PCSK9 in macaques reduces LDL cholesterol levels. Nat Biotechnol. 2021;39(8):949–57. doi: 10.1038/s41587-021-00933-4 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 63.Wang X, Raghavan A, Chen T, Qiao L, Zhang Y, Ding Q, et al. CRISPR-Cas9 Targeting of PCSK9 in Human Hepatocytes In Vivo-Brief Report. Arterioscler Thromb Vasc Biol. 2016;36(5):783–6. doi: 10.1161/ATVBAHA.116.307227 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 64.Pan X, Philippen L, Lahiri S, Lee C, Park S, Word T. In vivo ryr2 editing corrects catecholaminergic polymorphic ventricular tachycardia. Circ Res. 2018;123(8):953–63. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 65.Guo X, Gao M, Wang Y, Lin X, Yang L, Cong N. Ldl receptor gene-ablated hamsters: a rodent model of familial hypercholesterolemia with dominant inheritance and diet-induced coronary atherosclerosis. EBioMedicine. 2018;27:214–24. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 66.Zha Y, Lu Y, Zhang T, Yan K, Zhuang W, Liang J, et al. CRISPR/Cas9-mediated knockout of APOC3 stabilizes plasma lipids and inhibits atherosclerosis in rabbits. Lipids Health Dis. 2021;20(1):180. doi: 10.1186/s12944-021-01605-7 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 67.Zhang Y, Li H, Min Y-L, Sanchez-Ortiz E, Huang J, Mireault AA, et al. Enhanced CRISPR-Cas9 correction of Duchenne muscular dystrophy in mice by a self-complementary AAV delivery system. Sci Adv. 2020;6(8):eaay6812. doi: 10.1126/sciadv.aay6812 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 68.Zuo Y, Zhang C, Zhou Y, Li H, Xiao W, Herzog RW, et al. Liver-specific in vivo base editing of Angptl3 via AAV delivery efficiently lowers blood lipid levels in mice. Cell Biosci. 2023;13(1):109. doi: 10.1186/s13578-023-01036-0 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 69.Liu Z, Yang L, Yang Y, Li J, Chen Z, Guo C. Abe-mediated cardiac gene silencing via single aavs requires dna accessibility. Circ Res. 2025;136(3):318–20. [DOI] [PubMed] [Google Scholar]
  • 70.Liu Z, Chen S, Xie W, Song Y, Li J, Lai L, et al. Versatile and efficient in vivo genome editing with compact Streptococcus pasteurianus Cas9. Mol Ther. 2022;30(1):256–67. [DOI] [PMC free article] [PubMed]
  • 71.Feng Z, Huang X, Gao Y, Gao H, Na W, Tan C, et al. MST1R Gene Variants Predispose Individuals to Tetralogy of Fallot. Phenomics. 2025;4(6):548–61. doi: 10.1007/s43657-024-00175-9 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 72.Carroll D. Genome engineering with zinc-finger nucleases. Genetics. 2011;188(4):773–82. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 73.Joung JK, Sander JD. TALENs: a widely applicable technology for targeted genome editing. Nat Rev Mol Cell Biol. 2013;14(1):49–55. doi: 10.1038/nrm3486 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 74.Bhardwaj A, Nain V. TALENs-an indispensable tool in the era of CRISPR: a mini review. J Genet Eng Biotechnol. 2021;19(1):125. doi: 10.1186/s43141-021-00225-z [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 75.Mussolino C, Alzubi J, Fine EJ, Morbitzer R, Cradick TJ, Lahaye T, et al. TALENs facilitate targeted genome editing in human cells with high specificity and low cytotoxicity. Nucleic Acids Res. 2014;42(10):6762–73. doi: 10.1093/nar/gku305 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 76.Nemudryi AA, Valetdinova KR, Medvedev SP, Zakian SM. Talen and crispr/cas genome editing systems: tools of discovery. Acta Nat. 2014;6(3):19–40. [PMC free article] [PubMed] [Google Scholar]
  • 77.González Castro N, Bjelic J, Malhotra G, Huang C, Alsaffar SH. Comparison of the feasibility, efficiency, and safety of genome editing technologies. Int J Mol Sci. 2021;22(19). [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 78.Gostimskaya I. CRISPR-Cas9: A History of Its Discovery and Ethical Considerations of Its Use in Genome Editing. Biochemistry (Mosc). 2022;87(8):777–88. doi: 10.1134/S0006297922080090 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 79.Song B, Yang S, Hwang G, Yu J, Bae S. Analysis of NHEJ-based DNA repair after crispr-mediated dna cleavage. Int J Mol Sci. 2021;22(12). [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 80.Asmamaw M, Zawdie B. Mechanism and applications of CRISPR/Cas-9-mediated genome editing. Biologics. 2021;15:353–61. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 81.Uddin F, Rudin CM, Sen T. CRISPR Gene Therapy: Applications, Limitations, and Implications for the Future. Front Oncol. 2020;10:1387. doi: 10.3389/fonc.2020.01387 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 82.Preta G. Development of New Genome Editing Tools for the Treatment of Hyperlipidemia. Cells. 2023;12(20):2466. doi: 10.3390/cells12202466 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 83.Reichart D, Newby GA, Wakimoto H, Lun M, Gorham JM, Curran JJ, et al. Efficient in vivo genome editing prevents hypertrophic cardiomyopathy in mice. Nat Med. 2023;29(2):412–21. doi: 10.1038/s41591-022-02190-7 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 84.Jeong YK, Song B, Bae S. Current status and challenges of DNA base editing tools. Mol Ther. 2020;28(9):1938–52. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 85.Chuang YF, Wang PY, Kumar S, Lama S, Lin FL, Liu GS. Methods for in vitro CRISPR/CasRx-mediated RNA editing. Front Cell Dev Biol. 2021;9:667879. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 86.Zhang D, Zhu L, Gao Y, Wang Y, Li P. RNA editing enzymes: structure, biological functions and applications. Cell Biosci. 2024;14(1):34. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 87.Booth BJ, Nourreddine S, Katrekar D, Savva Y, Bose D, Long TJ, et al. RNA editing: Expanding the potential of RNA therapeutics. Mol Ther. 2023;31(6):1533–49. doi: 10.1016/j.ymthe.2023.01.005 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 88.Piazzi M, Bavelloni A, Salucci S, Faenza I, Blalock W. Alternative splicing, RNA editing, and the current limits of next generation sequencing. Genes. 2023;14(7):1–12. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 89.Cai R, Lv R, Shi X, Yang G, Jin J. CRISPR/dCas9 tools: epigenetic mechanism and application in gene transcriptional regulation. Int J Mol Sci. 2023;24(19). [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 90.Lyu P, Javidi-Parsijani P, Atala A, Lu B. Delivering Cas9/sgRNA ribonucleoprotein (RNP) by lentiviral capsid-based bionanoparticles for efficient “hit-and-run” genome editing. Nucleic Acids Res. 2019;47(17):e99. doi: 10.1093/nar/gkz605 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 91.Ueda J, Yamazaki T, Funakoshi H. Toward the development of epigenome editing-based therapeutics: potentials and challenges. Int J Mol Sci. 2023;24(5). [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 92.Rothgangl T, Dennis M, Lin P, Oka R, Witzigmann D, Villiger L. In vivo adenine base editing of PCSK9 in macaques reduces LDL cholesterol levels. Nat Biotechnol. 2021;39(8):949–57. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 93.Hoekstra M, VanEck M, VanBerkel T. Perspective: hepatocyte-directed base editing as novel treatment for human dyslipidemia-current status and remaining challenges. Arterioscler Thromb Vasc Biol. 2023;43(6):832–5. [DOI] [PubMed] [Google Scholar]
  • 94.Gillmore JD, Gane E, Taubel J, Kao J, Fontana M, Maitland ML, et al. CRISPR-Cas9 In Vivo Gene Editing for Transthyretin Amyloidosis. N Engl J Med. 2021;385(6):493–502. doi: 10.1056/NEJMoa2107454 [DOI] [PubMed] [Google Scholar]
  • 95.Hurley A, Lagor WR. Treating Cardiovascular Disease with Liver Genome Engineering. Curr Atheroscler Rep. 2022;24(2):75–84. doi: 10.1007/s11883-022-00986-z [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 96.Ohiri JC, McNally EM. Gene Editing and Gene-Based Therapeutics for Cardiomyopathies. Heart Fail Clin. 2018;14(2):179–88. doi: 10.1016/j.hfc.2017.12.006 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 97.Naso MF, Tomkowicz B, Perry WL 3rd, Strohl WR. Adeno-Associated Virus (AAV) as a Vector for Gene Therapy. BioDrugs. 2017;31(4):317–34. doi: 10.1007/s40259-017-0234-5 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 98.Kularatne RN, Crist RM, Stern ST. The Future of Tissue-Targeted Lipid Nanoparticle-Mediated Nucleic Acid Delivery. Pharmaceuticals (Basel). 2022;15(7):897. doi: 10.3390/ph15070897 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 99.Ravichandran AJ, Romeo FJ, Mazurek R, Ishikawa K. Barriers in Heart Failure Gene Therapy and Approaches to Overcome Them. Heart Lung Circ. 2023;32(7):780–9. doi: 10.1016/j.hlc.2023.02.011 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 100.Hajjar RJ, Ishikawa K. Introducing Genes to the Heart: All About Delivery. Circ Res. 2017;120(1):33–5. doi: 10.1161/CIRCRESAHA.116.310039 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 101.Marian AJ, van Rooij E, Roberts R. Genetics and Genomics of Single-Gene Cardiovascular Diseases: Common Hereditary Cardiomyopathies as Prototypes of Single-Gene Disorders. J Am Coll Cardiol. 2016;68(25):2831–49. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 102.McNally EM, Puckelwartz MJ. Genetic Variation in Cardiomyopathy and Cardiovascular Disorders. Circ J. 2015;79(7):1409–15. doi: 10.1253/circj.CJ-15-0536 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 103.Hirakawa MP, Krishnakumar R, Timlin JA, Carney JP, Butler KS. Gene editing and CRISPR in the clinic: current and future perspectives. Biosci Rep. 2020;40(4):BSR20200127. doi: 10.1042/BSR20200127 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 104.Francula-Zaninovic S, Nola I. Management of measurable variable cardiovascular disease risk factors. Curr Cardiol Rev. 2018;14(3):153–63. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 105.Lewis BS. First-in-human trial of PCSK9 gene editing therapy for lowering cholesterol: a new frontier in cardiovascular pharmacotherapy? News from AHA. Eur Heart J Cardiovasc Pharmacother. 2024;10(2):87–8. doi: 10.1093/ehjcvp/pvad095 [DOI] [PubMed] [Google Scholar]
  • 106.O’Donoghue M, Rosenson R, Gencer B, López J, Lepor N, Baum S. Small interfering RNA to reduce lipoprotein(a) in cardiovascular disease. N Engl J Med. 2022;387(20):1855–64. [DOI] [PubMed] [Google Scholar]
  • 107.Graham MJ, Lee RG, Brandt TA, Tai L-J, Fu W, Peralta R, et al. Cardiovascular and Metabolic Effects of ANGPTL3 Antisense Oligonucleotides. N Engl J Med. 2017;377(3):222–32. doi: 10.1056/NEJMoa1701329 [DOI] [PubMed] [Google Scholar]
  • 108.Conboy I, Murthy N, Etienne J, Robinson Z. Making gene editing a therapeutic reality. F1000Res. 2018;7:F1000 Faculty Rev-1970. doi: 10.12688/f1000research.16106.1 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 109.Tall AR, Fuster JJ. Clonal hematopoiesis in cardiovascular disease and therapeutic implications. Nat Cardiovasc Res. 2022;1(2):116–24. doi: 10.1038/s44161-021-00015-3 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 110.Mahley R. Apolipoprotein e: from cardiovascular disease to neurodegenerative disorders. J Mol Med. 2016;94(7):739–46. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 111.Sands MS. AAV-mediated liver-directed gene therapy. Methods Mol Biol. 2011;807:141–57. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 112.Bish LT, Morine K, Sleeper MM, Sanmiguel J, Wu D, Gao G, et al. Adeno-associated virus (AAV) serotype 9 provides global cardiac gene transfer superior to AAV1, AAV6, AAV7, and AAV8 in the mouse and rat. Hum Gene Ther. 2008;19(12):1359–68. doi: 10.1089/hum.2008.123 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 113.Foust KD, Nurre E, Montgomery CL, Hernandez A, Chan CM, Kaspar BK. Intravascular AAV9 preferentially targets neonatal neurons and adult astrocytes. Nat Biotechnol. 2009;27(1):59–65. doi: 10.1038/nbt.1515 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 114.Allocca M, Doria M, Petrillo M, Colella P, Garcia-Hoyos M, Gibbs D, et al. Serotype-dependent packaging of large genes in adeno-associated viral vectors results in effective gene delivery in mice. J Clin Invest. 2008;118(5):1955–64. doi: 10.1172/JCI34316 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 115.Costa Verdera H, Kuranda K, Mingozzi F. AAV Vector Immunogenicity in Humans: A Long Journey to Successful Gene Transfer. Mol Ther. 2020;28(3):723–46. doi: 10.1016/j.ymthe.2019.12.010 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 116.Ji J, Lefebvre E, Laporte J. Comparative in vivo characterization of newly discovered myotropic adeno-associated vectors. Skelet Muscle. 2024;14(1):9. doi: 10.1186/s13395-024-00341-7 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 117.Zhang X, Chai Z, Samulski R, Li C. Bound protein- and peptide-based strategies for adeno-associated virus vector-mediated gene therapy: where do we stand now?. Hum Gene Ther. 2020;31(21–22):1146–54. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 118.Meng J-S, He Y, Yang H-B, Zhou L-P, Wang S-Y, Feng X-L, et al. Melittin analog p5RHH enhances recombinant adeno-associated virus transduction efficiency. J Integr Med. 2024;22(1):72–82. doi: 10.1016/j.joim.2024.01.001 [DOI] [PubMed] [Google Scholar]
  • 119.Ricobaraza A, Gonzalez-Aparicio M, Mora-Jimenez L, Lumbreras S, Hernandez-Alcoceba R. High-capacity adenoviral vectors: expanding the scope of gene therapy. Int J Mol Sci. 2020;21(10). [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 120.Vetrini F, Ng P. Gene therapy with helper-dependent adenoviral vectors: current advances and future perspectives. Viruses. 2010;2(9):1886–917. doi: 10.3390/v2091886 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 121.Raper SE, Chirmule N, Lee FS, Wivel NA, Bagg A, Gao G, et al. Fatal systemic inflammatory response syndrome in a ornithine transcarbamylase deficient patient following adenoviral gene transfer. Mol Genet Metab. 2003;80(1–2):148–58. doi: 10.1016/j.ymgme.2003.08.016 [DOI] [PubMed] [Google Scholar]
  • 122.Sun Y, Lv X, Ding P, Wang L, Sun Y, Li S. Exploring the functions of polymers in adenovirus-mediated gene delivery: evading immune response and redirecting tropism. Acta Biomater. 2019;97:93–104. [DOI] [PubMed] [Google Scholar]
  • 123.Jung HN, Lee S-Y, Lee S, Youn H, Im H-J. Lipid nanoparticles for delivery of RNA therapeutics: Current status and the role of in vivo imaging. Theranostics. 2022;12(17):7509–31. doi: 10.7150/thno.77259 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 124.Kazemian P, Yu S-Y, Thomson SB, Birkenshaw A, Leavitt BR, Ross CJD. Lipid-Nanoparticle-Based Delivery of CRISPR/Cas9 Genome-Editing Components. Mol Pharm. 2022;19(6):1669–86. doi: 10.1021/acs.molpharmaceut.1c00916 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 125.Vavassori V, Ferrari S, Beretta S, Asperti C, Albano L, Annoni A, et al. Lipid nanoparticles allow efficient and harmless ex vivo gene editing of human hematopoietic cells. Blood. 2023;142(9):812–26. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 126.Moghimi SM, Simberg D. Pro-inflammatory concerns with lipid nanoparticles. Mol Ther. 2022;30(6):2109–10. doi: 10.1016/j.ymthe.2022.04.011 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 127.Kim EH, Teerdhala SV, Padilla MS, Joseph RA, Li JJ, Haley RM, et al. Lipid nanoparticle-mediated RNA delivery for immune cell modulation. Eur J Immunol. 2024;54(12):e2451008. doi: 10.1002/eji.202451008 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 128.Wang J, Ding Y, Chong K, Cui M, Cao Z, Tang C. Recent advances in lipid nanoparticles and their safety concerns for mRNA delivery. Vaccines. 2024;12(10). [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 129.Gordon SM, Li H, Zhu X, Shah AS, Lu LJ, Davidson WS. A comparison of the mouse and human lipoproteome: suitability of the mouse model for studies of human lipoproteins. J Proteome Res. 2015;14(6):2686–95. doi: 10.1021/acs.jproteome.5b00213 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 130.Milani-Nejad N, Janssen PML. Small and large animal models in cardiac contraction research: advantages and disadvantages. Pharmacol Ther. 2014;141(3):235–49. doi: 10.1016/j.pharmthera.2013.10.007 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 131.Martino AT, Markusic DM. Immune Response Mechanisms against AAV Vectors in Animal Models. Mol Ther Methods Clin Dev. 2020;17:198–208. doi: 10.1016/j.omtm.2019.12.008 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 132.Rahim I, Kasim N, Omar E, Muid S, Nawawi H. Evaluation on the effectiveness of high cholesterol diet feeding in inducing early and established atherosclerotic lesions in New Zealand white rabbits. Folia Biol. 2023;28(4). [DOI] [PubMed] [Google Scholar]
  • 133.Tanihara F, Hirata M, Otoi T. Current status of the application of gene editing in pigs. J Reprod Dev. 2021;67(3):177–87. doi: 10.1262/jrd.2021-025 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 134.Harding JD. Nonhuman Primates and Translational Research: Progress, Opportunities, and Challenges. ILAR J. 2017;58(2):141–50. doi: 10.1093/ilar/ilx033 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 135.Muravyeva A, Smirnikhina S. Adenoviral vectors for gene therapy of hereditary diseases. Biol. 2024;13(12). [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 136.Maina A, Foster GR. Hepatitis after gene therapy, what are the possible causes? J Viral Hepat. 2024;31 Suppl 1:14–20. [DOI] [PubMed] [Google Scholar]
  • 137.Prasad S, Dimmock DP, Greenberg B, Walia JS, Sadhu C, Tavakkoli F, et al. Immune Responses and Immunosuppressive Strategies for Adeno-Associated Virus-Based Gene Therapy for Treatment of Central Nervous System Disorders: Current Knowledge and Approaches. Hum Gene Ther. 2022;33(23–24):1228–45. doi: 10.1089/hum.2022.138 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 138.Guo C, Ma X, Gao F, Guo Y. Off-target effects in CRISPR/Cas9 gene editing. Front Bioeng Biotechnol. 2023;11:1143157. doi: 10.3389/fbioe.2023.1143157 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 139.Park S, Beal PA. Off-Target Editing by CRISPR-Guided DNA Base Editors. Biochemistry. 2019;58(36):3727–34. doi: 10.1021/acs.biochem.9b00573 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 140.Hunt JMT, Samson CA, Rand A du, Sheppard HM. Unintended CRISPR-Cas9 editing outcomes: a review of the detection and prevalence of structural variants generated by gene-editing in human cells. Hum Genet. 2023;142(6):705–20. doi: 10.1007/s00439-023-02561-1 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 141.Liu J, Koay TW, Maiakovska O, Zayas M, Grimm D. Progress in Bioengineering of Myotropic Adeno-Associated Viral Gene Therapy Vectors. Hum Gene Ther. 2023;34(9–10):350–64. doi: 10.1089/hum.2023.057 [DOI] [PubMed] [Google Scholar]
  • 142.Singh M, Bindal G, Misra CS, Rath D. The era of Cas12 and Cas13 CRISPR-based disease diagnosis. Crit Rev Microbiol. 2022;48(6):714–29. doi: 10.1080/1040841X.2021.2025041 [DOI] [PubMed] [Google Scholar]
  • 143.Hillary VE, Ceasar SA. A Review on the Mechanism and Applications of CRISPR/Cas9/Cas12/Cas13/Cas14 Proteins Utilized for Genome Engineering. Mol Biotechnol. 2023;65(3):311–25. doi: 10.1007/s12033-022-00567-0 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 144.Vakulskas CA, Dever DP, Rettig GR, Turk R, Jacobi AM, Collingwood MA, et al. A high-fidelity Cas9 mutant delivered as a ribonucleoprotein complex enables efficient gene editing in human hematopoietic stem and progenitor cells. Nat Med. 2018;24(8):1216–24. doi: 10.1038/s41591-018-0137-0 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 145.Dixit S, Kumar A, Srinivasan K, Vincent PMDR, Ramu Krishnan N. Advancing genome editing with artificial intelligence: opportunities, challenges, and future directions. Front Bioeng Biotechnol. 2024;11:1335901. doi: 10.3389/fbioe.2023.1335901 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 146.Quazi S. Artificial intelligence and machine learning in precision and genomic medicine. Med Oncol. 2022;39(8):120. doi: 10.1007/s12032-022-01711-1 [DOI] [PMC free article] [PubMed] [Google Scholar] [Retracted]
  • 147.Horie T, Ono K. VERVE-101: a promising CRISPR-based gene editing therapy that reduces LDL-C and PCSK9 levels in HeFH patients. Eur Heart J Cardiovasc Pharmacother. 2024;10(2):89–90. doi: 10.1093/ehjcvp/pvad103 [DOI] [PubMed] [Google Scholar]
  • 148.Vafai S, Karsten V, Jensen C, Falzone R, Lister T, Stolz L, et al. Abstract 4139206: Design of heart-2: a phase 1b clinical trial of verve-102, an in vivo base editing medicine delivered by a galnac-lnp and targeting pcsk9 to durably lower ldl cholesterol. Circ. 2024;150(Suppl_1):A4139206-A. [Google Scholar]
  • 149.World’s First: In Vivo Gene Editing Product ART002 Achieves Saturation of Pharmacological Effect in Humans and Reduces LDL-C Safely and Effectively [press release]. AccurEdit Therapeutics Press; 2025. [Google Scholar]
  • 150.Vutrisiran in Patients with Transthyretin Amyloidosis with Cardiomyopathy. N Engl J Med. 2025;392(18):1870–1. doi: 10.1056/nejmc2501792 [DOI] [PubMed] [Google Scholar]
  • 151.Patel AGM, Li P, Badrish N, Kesari A, Shah KB. Transthyretin Cardiac Amyloidosis: Current and Emerging Therapies. Curr Cardiol Rep. 2025;27(1):33. doi: 10.1007/s11886-024-02172-w [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 152.Greer-Short A, Greenwood A, Leon EC, Qureshi TN, von Kraut K, Wong J, et al. AAV9-mediated MYBPC3 gene therapy with optimized expression cassette enhances cardiac function and survival in MYBPC3 cardiomyopathy models. Nat Commun. 2025;16(1):2196. doi: 10.1038/s41467-025-57481-7 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 153.REGENXBIO reports positive biomarker data from affinity Duchenne® trial of RGX-202 gene therapy [press release]. 2025. [Google Scholar]
  • 154.Kim Y, Landstrom AP, Shah SH, Wu JC, Seidman CE, American Heart Association. Gene Therapy in Cardiovascular Disease: Recent Advances and Future Directions in Science: A Science Advisory From the American Heart Association. Circulation. 2024;150(23):e471–80. doi: 10.1161/CIR.0000000000001296 [DOI] [PubMed] [Google Scholar]
  • 155.Ayanoğlu FB, Elçin AE, Elçin YM. Bioethical issues in genome editing by CRISPR-Cas9 technology. Turk J Biol. 2020;44(2):110–20. doi: 10.3906/biy-1912-52 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 156.National Academies of Sciences E, Medicine, National Academy of M, National Academy of S, Committee on Human Gene Editing: Scientific M, Ethical C. Human Genome Editing: Science, Ethics, and Governance. Washington (DC): National Academies Press (US); 2017. [PubMed] [Google Scholar]
  • 157.Lux CT, Scharenberg AM. Therapeutic Gene Editing Safety and Specificity. Hematol Oncol Clin North Am. 2017;31(5):787–95. doi: 10.1016/j.hoc.2017.05.002 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 158.Sciences Na, Medicine Na, Editing C, Considerations E. Human genome editing: science, ethics, and governance. National Academies Press; 2017. [PubMed] [Google Scholar]

Decision Letter 0

Chen Ling

28 Mar 2025

Dear Dr. Vo,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

Please submit your revised manuscript by May 12 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.

  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.

  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols . Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols .

We look forward to receiving your revised manuscript.

Kind regards,

Chen Ling, Ph.D.

Academic Editor

PLOS ONE

Journal requirements:

When submitting your revision, we need you to address these additional requirements.

1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at

https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and

https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf

Additional Editor Comments (if provided):

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

Reviewer #1: Yes

Reviewer #2: Partly

Reviewer #3: Yes

**********

2. Has the statistical analysis been performed appropriately and rigorously? -->?>

Reviewer #1: N/A

Reviewer #2: N/A

Reviewer #3: Yes

**********

3. Have the authors made all data underlying the findings in their manuscript fully available??>

The PLOS Data policy

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: Yes

**********

4. Is the manuscript presented in an intelligible fashion and written in standard English??>

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: Yes

**********

Reviewer #1: 1. The author should add the full name before the first use of a certain abbreviation�including “CRISPR-Cas9”�. And the Introduction part should include general introduction�history, background�, why to write this review, the focus and highlights of this review, the following logical sequence of the review, best presented in 3-5 paragraphs.

2. Considering that most of the included studies used the CRISPR system, I suggest the author add a separate section to summarize the discovery and development of the basic CRISPR system and base editors.

3. I understand that the authors‘ main focus is on screened articles, but the authors mention the use of gene editing therapies in animal models in the title. I would suggest that the authors add a separate section to discuss the impact of various types of animal models in gene editing therapies for cardiovascular disease, especially given that some studies are currently using rabbits, dogs and cats, among others.

4. Ethical issues of gene editing treatments should be mentioned.

5. AAV subtypes (AAV8, AAV9) should be discussed.

Reviewer #2: I like the topic of this review. If it could be properly written, it will be an important reference for the field. However, there are major problems in the contents and logics. The following questions need to be solved:

1. There must be something wrong with keyword search. You need to truly understand this field in order to write a good review paper. You need to curate literature search manually since some good papers could not be easily searched by just looking at title or abstract. Just to give you some examples of missed key papers in high-profile journals:

� Lebek S, Chemello F, Caravia XM, Tan W, Li H, Chen K, Xu L, Liu N, Bassel-Duby R, Olson EN. Ablation of CaMKIIδ oxidation by CRISPR-Cas9 base editing as a therapy for cardiac disease. Science. 2023 Jan 13;379(6628):179-185. doi: 10.1126/science.ade1105. Epub 2023 Jan 12. PMID: 36634166; PMCID: PMC10150399.

� Lebek S, Caravia XM, Chemello F, Tan W, McAnally JR, Chen K, Xu L, Liu N, Bassel-Duby R, Olson EN. Elimination of CaMKIIδ Autophosphorylation by CRISPR-Cas9 Base Editing Improves Survival and Cardiac Function in Heart Failure in Mice. Circulation. 2023 Nov 7;148(19):1490-1504. doi: 10.1161/CIRCULATIONAHA.123.065117. Epub 2023 Sep 15. PMID: 37712250; PMCID: PMC10842988.

� Wu S, Yang P, Geng Z, Li Y, Guo Z, Lou Y, Zhang S, Xiong J, Hu H, Guo X, Pu WT, Zhang Y, Zhu D, Zhang B. Base editing effectively prevents early-onset severe cardiomyopathy in Mybpc3 mutant mice. Cell Res. 2024 Apr;34(4):327-330. doi: 10.1038/s41422-024-00930-7. Epub 2024 Feb 9. PMID: 38337022; PMCID: PMC10978934.

� Liu Z, Yang L, Yang Y, Li J, Chen Z, Guo C, Guo Q, Li Q, Zhao D, Hu X, Gao F, Guo Y. ABE-Mediated Cardiac Gene Silencing via Single AAVs Requires DNA Accessibility. Circ Res. 2025 Jan 31;136(3):318-320. doi: 10.1161/CIRCRESAHA.124.325611. Epub 2025 Jan 16. PMID: 39817340.

� Yang L, Liu Z, Chen G, Chen Z, Guo C, Ji X, Cui Q, Sun Y, Hu X, Zheng Y, Li Y, Gao F, Chen L, Zhou P, Pu WT, Guo Y. MicroRNA-122-Mediated Liver Detargeting Enhances the Tissue Specificity of Cardiac Genome Editing. Circulation. 2024 May 28;149(22):1778-1781. doi: 10.1161/CIRCULATIONAHA.123.065438. Epub 2024 May 28. PMID: 38805581.

� Ghahremani S, Kanwal A, Pettinato A, Ladha F, Legere N, Thakar K, Zhu Y, Tjong H, Wilderman A, Stump WT, Greenberg L, Greenberg MJ, Cotney J, Wei CL, Hinson JT. CRISPR Activation Reverses Haploinsufficiency and Functional Deficits Caused by TTN Truncation Variants. Circulation. 2024 Apr 16;149(16):1285-1297. doi: 10.1161/CIRCULATIONAHA.123.063972. Epub 2024 Jan 18. PMID: 38235591; PMCID: PMC11031707.

� Ma S, Jiang W, Liu X, Lu WJ, Qi T, Wei J, Wu F, Chang Y, Zhang S, Song Y, Bai R, Wang J, Lee AS, Zhang H, Wang Y, Lan F. Efficient Correction of a Hypertrophic Cardiomyopathy Mutation by ABEmax-NG. Circ Res. 2021 Oct 29;129(10):895-908. doi: 10.1161/CIRCRESAHA.120.318674. Epub 2021 Sep 16. PMID: 34525843.

2. the paper need to be rewriten to discuss some key concepts with better structures and logics:

� AAV vs LNP vs AdV: what are differences between these vectors? The Pros and Cons of each of these vectors should be analysed and described. Why some studies used AAV while other studies used LNP? What is the rationale behind vector choices?

� Heart vs Liver: why some studies target the liver while other studies target the heart? Are they treating different type of diseases? What is the rationale behind organ choices? Are there difficulties or concerns to deliver to each organ?

� Cas9 NHEJ vs base editing vs epigenome editing vs RNA editing vs HDR: the paper should explain working mechanisms of each editor and their strength or weakness. Why certain studies used certain editor?

� Rare disease versus common disease: some therapies are specific for rare disease only (such as ABE correction of rare disease mutation). Other therapies are suitable for both rare and common diseases (such as pcsk9 and camk2d studies). Analysis from this angle is necessary to determine which type of therapy is more realistic and promising.

� Safety concerns from vector, editor, gene target should be separately and more detailed and systemically summarized.

Reviewer #3: This review examines the application of gene editing technologies in animal models of CVDs, summarizing the therapeutic efficacy and safety profiles of tools such as CRISPR-Cas9 in treating hyperlipidemia, cardiomyopathy, and related conditions. The article also discusses current limitations and future directions, including clinical translation and ethical considerations. While the manuscript presents a logically structured and comprehensive overview, certain aspects require supplementation.

1. The Introduction fails to explicitly delineate the fundamental distinctions between gene editing and conventional therapies (e.g., target specificity). The latest studies such as PMID: 37662968 can be referenced.

2. Page 8 states "Lipid nanoparticles were employed...to the liver (PCSK9, LDLR)" without explaining why the liver serves as a critical therapeutic target for CVD treatment, creating an incomplete logical progression.

3. Page 8 notes "editing efficiency varies across species" but lacks mechanistic analysis of underlying causes.

4. Page 14 could benefit from incorporation of recent findings (e.g., PMID: 40061823).

5. Page 18 requires more detailed technical descriptions of gene editing protocols, particularly CRISPR-Cas9 sgRNA design principles.

6. Page 11 should address interspecies biological differences in gene editing responses (e.g., mice vs. non-human primates) and their clinical translation implications.

7. Pages 20-23 would be strengthened by including updates on human clinical trials, particularly late-stage or approved therapies.

8. The verbose sentence on Page 4 ("Early gene replacement therapies...") could be condensed to: "Early therapies introduced functional gene copies to restore normal function."

9. In Introduction or Discussion, current advances in AAV research (e.g., transduction efficiency enhancement) should be cited (e.g., PMID: 38307819).

10. Terminology inconsistency ("CRISPR-Cas9" vs. "CRISPR/Cas9") requires standardization.

**********

what does this mean? ). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy

Reviewer #1: No

Reviewer #2: Yes:  Yuxuan Guo

Reviewer #3: No

**********

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org . Please note that Supporting Information files do not need this step.

PLoS One. 2025 Jun 4;20(6):e0325330. doi: 10.1371/journal.pone.0325330.r003

Author response to Decision Letter 1


7 Apr 2025

I would like to express my gratitude for your thoughtful and constructive feedback on my manuscript. Your detailed comments have been invaluable in guiding the revision process. In response to your suggestions, I have meticulously addressed each point to enhance the clarity, completeness, and precision of my work. Below, I outline the revisions made to the manuscript based on your insightful remarks.

Reviewer #1:

1. The author should add the full name before the first use of a certain abbreviation including “CRISPR-Cas9”. And the Introduction part should include general introduction history, background, why to write this review, the focus and highlights of this review, the following logical sequence of the review, best presented in 3-5 paragraphs

Respond:

Thank you for the suggestion. I have provided the full name for all abbreviations upon their first use. Additionally, I have revised the Introduction to include the historical context, the rationale for conducting this review, the key highlights, and the logical structure, as recommended.

2. Considering that most of the included studies used the CRISPR system, I suggest the author add a separate section to summarize the discovery and development of the basic CRISPR system and base editors.

Respond:

I appreciate this recommendation. A dedicated section summarizing the history and development of the CRISPR system and base editors has been added to the Discussion section.

3. I understand that the authors‘ main focus is on screened articles, but the authors mention the use of gene editing therapies in animal models in the title. I would suggest that the authors add a separate section to discuss the impact of various types of animal models in gene editing therapies for cardiovascular disease, especially given that some studies are currently using rabbits, dogs and cats, among others

Respond:

In response to this valuable suggestion, I have added a dedicated section that discusses the roles of various animal species used in gene editing studies for cardiovascular disease, including their respective advantages and translational significance.

4. Ethical issues of gene editing treatments should be mentioned.

Respond:

I have expanded the discussion on ethical considerations to specifically address the implications, challenges, and regulatory concerns associated with gene editing technologies in preclinical and clinical contexts.

5. AAV subtypes (AAV8, AAV9) should be discussed.

Respond:

A comparative analysis of AAV subtypes, including AAV8 and AAV9, has been incorporated into the section titled “Delivery Vector Comparisons” within the Discussion, highlighting their tissue tropism, efficacy, and potential clinical applications.

Reviewer #2:

1. There must be something wrong with keyword search. You need to truly understand this field in order to write a good review paper. You need to curate literature search manually since some good papers could not be easily searched by just looking at title or abstract. Just to give you some examples of missed key papers in high-profile journals:

• Lebek S, Chemello F, Caravia XM, Tan W, Li H, Chen K, Xu L, Liu N, Bassel-Duby R, Olson EN. Ablation of CaMKIIδ oxidation by CRISPR-Cas9 base editing as a therapy for cardiac disease. Science. 2023 Jan 13;379(6628):179-185. doi: 10.1126/science.ade1105. Epub 2023 Jan 12. PMID: 36634166; PMCID: PMC10150399.

• Lebek S, Caravia XM, Chemello F, Tan W, McAnally JR, Chen K, Xu L, Liu N, Bassel-Duby R, Olson EN. Elimination of CaMKIIδ Autophosphorylation by CRISPR-Cas9 Base Editing Improves Survival and Cardiac Function in Heart Failure in Mice. Circulation. 2023 Nov 7;148(19):1490-1504. doi: 10.1161/CIRCULATIONAHA.123.065117. Epub 2023 Sep 15. PMID: 37712250; PMCID: PMC10842988.

• Wu S, Yang P, Geng Z, Li Y, Guo Z, Lou Y, Zhang S, Xiong J, Hu H, Guo X, Pu WT, Zhang Y, Zhu D, Zhang B. Base editing effectively prevents early-onset severe cardiomyopathy in Mybpc3 mutant mice. Cell Res. 2024 Apr;34(4):327-330. doi: 10.1038/s41422-024-00930-7. Epub 2024 Feb 9. PMID: 38337022; PMCID: PMC10978934.

• Liu Z, Yang L, Yang Y, Li J, Chen Z, Guo C, Guo Q, Li Q, Zhao D, Hu X, Gao F, Guo Y. ABE-Mediated Cardiac Gene Silencing via Single AAVs Requires DNA Accessibility. Circ Res. 2025 Jan 31;136(3):318-320. doi: 10.1161/CIRCRESAHA.124.325611. Epub 2025 Jan 16. PMID: 39817340.

• Yang L, Liu Z, Chen G, Chen Z, Guo C, Ji X, Cui Q, Sun Y, Hu X, Zheng Y, Li Y, Gao F, Chen L, Zhou P, Pu WT, Guo Y. MicroRNA-122-Mediated Liver Detargeting Enhances the Tissue Specificity of Cardiac Genome Editing. Circulation. 2024 May 28;149(22):1778-1781. doi: 10.1161/CIRCULATIONAHA.123.065438. Epub 2024 May 28. PMID: 38805581

• Ghahremani S, Kanwal A, Pettinato A, Ladha F, Legere N, Thakar K, Zhu Y, Tjong H, Wilderman A, Stump WT, Greenberg L, Greenberg MJ, Cotney J, Wei CL, Hinson JT. CRISPR Activation Reverses Haploinsufficiency and Functional Deficits Caused by TTN Truncation Variants. Circulation. 2024 Apr 16;149(16):1285-1297. doi: 10.1161/CIRCULATIONAHA.123.063972. Epub 2024 Jan 18. PMID: 38235591; PMCID: PMC11031707.

• Ma S, Jiang W, Liu X, Lu WJ, Qi T, Wei J, Wu F, Chang Y, Zhang S, Song Y, Bai R, Wang J, Lee AS, Zhang H, Wang Y, Lan F. Efficient Correction of a Hypertrophic Cardiomyopathy Mutation by ABEmax-NG. Circ Res. 2021 Oct 29;129(10):895-908. doi: 10.1161/CIRCRESAHA.120.318674. Epub 2021 Sep 16. PMID: 34525843.

Respond:

Thank you for highlighting these omissions and providing valuable references. I would like to clarify that some of the suggested articles (e.g., doi: 10.1038/s41422-024-00930-7, 10.1161/CIRCRESAHA.124.325611, and 10.1161/CIRCULATIONAHA.123.065438) were identified during my initial search but were excluded as they are letters or correspondences, which did not meet our inclusion criteria focused on original research. Additionally, the article with doi: 10.1161/CIRCULATIONAHA.123.063972 was excluded due to its use of a cell-based model rather than an animal model. However, I acknowledge that three important articles (doi: 10.1126/science.ade1105, 10.1161/CIRCULATIONAHA.123.065117, and 10.1161/CIRCRESAHA.120.318674) were inadvertently omitted. I have now revised the search strategy and manually curated additional studies, which has increased the total number of included studies to 50. However, I acknowledge that even with the modified search query, some articles may not have been included in the final analysis.Furthermore, the inclusion criteria have been clarified for better transparency.

2. the paper need to be rewriten to discuss some key concepts with better structures and logics:

AAV vs LNP vs AdV: what are differences between these vectors? The Pros and Cons of each of these vectors should be analysed and described. Why some studies used AAV while other studies used LNP? What is the rationale behind vector choices?

Heart vs Liver: why some studies target the liver while other studies target the heart? Are they treating different type of diseases? What is the rationale behind organ choices? Are there difficulties or concerns to deliver to each organ?

Cas9 NHEJ vs base editing vs epigenome editing vs RNA editing vs HDR: the paper should explain working mechanisms of each editor and their strength or weakness. Why certain studies used certain editor?

Rare disease versus common disease: some therapies are specific for rare disease only (such as ABE correction of rare disease mutation). Other therapies are suitable for both rare and common diseases (such as pcsk9 and camk2d studies). Analysis from this angle is necessary to determine which type of therapy is more realistic and promising.

Safety concerns from vector, editor, gene target should be separately and more detailed and systemically summarized.

Respond:

Thank you for the insightful feedback. I have substantially revised the Discussion section to include dedicated subsections addressing each of these important topics.

Reviewer #3:

1. The Introduction fails to explicitly delineate the fundamental distinctions between gene editing and conventional therapies (e.g., target specificity). The latest studies such as PMID: 37662968 can be referenced.

Respond:

I have revised the Introduction to more clearly highlight the mechanistic and therapeutic distinctions between gene editing approaches and conventional treatments. The suggested reference (PMID: 37662968) has been cited to support this revision.

2. Page 8 states "Lipid nanoparticles were employed...to the liver (PCSK9, LDLR)" without explaining why the liver serves as a critical therapeutic target for CVD treatment, creating an incomplete logical progression.

Respond:

To enhance the logical coherence of the manuscript, a new subsection has been added to the Discussion to explain the rationale for targeting the liver in cardiovascular therapy, including a summary of key metabolic and regulatory roles of hepatic tissue.

3. Page 8 notes "editing efficiency varies across species" but lacks mechanistic analysis of underlying causes.

Respond:

I have expanded the “Species Models” section to include a mechanistic discussion on factors influencing interspecies variability in gene editing outcomes, including genomic context, immune response, and delivery efficiency..

4. Page 14 could benefit from incorporation of recent findings (e.g., PMID: 40061823).

Respond:

The recommended study (PMID: 40061823) has been reviewed and cited in the updated manuscript to support the discussion of recent advances.

5. Page 18 requires more detailed technical descriptions of gene editing protocols, particularly CRISPR-Cas9 sgRNA design principles.

Respond:

A technical explanation of CRISPR-Cas9 sgRNA design and base editing strategies has been added to the section “The development of gene editing systems” in the Discussion sectiom.

6. Page 11 should address interspecies biological differences in gene editing responses (e.g., mice vs. non-human primates) and their clinical translation implications.

Respond:

This important point has been addressed by expanding the “Species Models” section to discuss interspecies differences, such as those between mice and non-human primates, and their implications for translational research.

7. Pages 20-23 would be strengthened by including updates on human clinical trials, particularly late-stage or approved therapies.

Respond:

The manuscript has been updated to include the latest developments in human clinical trials for gene editing-based therapies, with an emphasis on ongoing and late-stage studies relevant to cardiovascular applications.

8. The verbose sentence on Page 4 ("Early gene replacement therapies...") could be condensed to: "Early therapies introduced functional gene copies to restore normal function."

Respond:

The sentence has been revised for conciseness as follows: “Early therapies introduced functional gene copies to restore normal function.”

9. In Introduction or Discussion, current advances in AAV research (e.g., transduction efficiency enhancement) should be cited (e.g., PMID: 38307819).

Respond:

Recent advances in AAV vector development, particularly with respect to enhanced tissue transduction efficiency, have been included in the Discussion. The suggested reference (PMID: 38307819) has also been cited.

10. Terminology inconsistency ("CRISPR-Cas9" vs. "CRISPR/Cas9") requires standardization.

Respond:

I have reviewed the manuscript and standardized all terminology to “CRISPR-Cas9” for consistency and clarity.

Attachment

Submitted filename: Respond to Reviewers comments.docx

pone.0325330.s004.docx (26.5KB, docx)

Decision Letter 1

Chen Ling

30 Apr 2025

Dear Dr. Vo,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

Please submit your revised manuscript by Jun 14 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.

  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.

  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols . Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols .

We look forward to receiving your revised manuscript.

Kind regards,

Chen Ling, Ph.D.

Academic Editor

PLOS ONE

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

Reviewer #2: (No Response)

Reviewer #3: All comments have been addressed

**********

2. Is the manuscript technically sound, and do the data support the conclusions??>

Reviewer #2: Yes

Reviewer #3: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously? -->?>

Reviewer #2: N/A

Reviewer #3: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available??>

The PLOS Data policy

Reviewer #2: Yes

Reviewer #3: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English??>

Reviewer #2: Yes

Reviewer #3: Yes

**********

Reviewer #2: The authors addressed most of my questions properly, except for the exclusion of important short-format papers that are still quite important to the field. Research letters are still original research articles, not simple correspondences.

1. Thank you for highlighting these omissions and providing valuable references. I would like to clarify that some of the suggested articles (e.g., doi: 10.1038/s41422-024-00930-7, 10.1161/CIRCRESAHA.124.325611, and 10.1161/CIRCULATIONAHA.123.065438) were identified during my initial search but were excluded as they are letters or correspondences, which did not meet our inclusion criteria focused on original research.

Re: This is exactly the problem with your exclusion criteria. These excluded research letter papers are still original research and they are peer-reviewed following the same standard as research articles. Their shorter formats simply mean they are focused on single strong points that do not need longer formats. You should still include these papers in your review.

Reviewer #3: The author has carefully revised the manuscript according to the comments of the reviewer, and there is no problem now. It is recommended to accept.

**********

what does this mean? ). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy

Reviewer #2: Yes:  Yuxuan Guo

Reviewer #3: No

**********

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org . Please note that Supporting Information files do not need this step.

PLoS One. 2025 Jun 4;20(6):e0325330. doi: 10.1371/journal.pone.0325330.r005

Author response to Decision Letter 2


2 May 2025

I would like to express my gratitude for your thoughtful and constructive feedback on my manuscript. Below, I outline the revisions made to the manuscript based on your insightful remarks.

Reviewer #2:

The authors addressed most of my questions properly, except for the exclusion of important short-format papers that are still quite important to the field. Research letters are still original research articles, not simple correspondences.

1. Thank you for highlighting these omissions and providing valuable references. I would like to clarify that some of the suggested articles (e.g., doi: 10.1038/s41422-024-00930-7, 10.1161/CIRCRESAHA.124.325611, and 10.1161/CIRCULATIONAHA.123.065438) were identified during my initial search but were excluded as they are letters or correspondences, which did not meet our inclusion criteria focused on original research.

Re: This is exactly the problem with your exclusion criteria. These excluded research letter papers are still original research and they are peer-reviewed following the same standard as research articles. Their shorter formats simply mean they are focused on single strong points that do not need longer formats. You should still include these papers in your review.

Respond:

Thank you for this important clarification. In light of your comment, I have revised inclusion criteria and incorporated the relevant research letters into the final analysis. As a result, the total number of studies included in the review has been updated to 57.

Attachment

Submitted filename: Respond_to_Reviewers_comments_auresp_2.docx

pone.0325330.s005.docx (19.9KB, docx)

Decision Letter 2

Chen Ling

12 May 2025

Gene editing therapy as a therapeutic approach for cardiovascular diseases in animal models: a scoping review

PONE-D-25-07256R2

Dear Dr. Vo,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager®  and clicking the ‘Update My Information' link at the top of the page. If you have any questions relating to publication charges, please contact our Author Billing department directly at authorbilling@plos.org.

If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Chen Ling, Ph.D.

Academic Editor

PLOS ONE

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

Reviewer #2: All comments have been addressed

**********

2. Is the manuscript technically sound, and do the data support the conclusions??>

Reviewer #2: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously? -->?>

Reviewer #2: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available??>

The PLOS Data policy

Reviewer #2: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English??>

Reviewer #2: Yes

**********

Reviewer #2: All my concerns have been properly addressed. I have no further comments on the content of this manuscript.

**********

what does this mean? ). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy

Reviewer #2: No

**********

Acceptance letter

Chen Ling

PONE-D-25-07256R2

PLOS ONE

Dear Dr. Vo,

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team.

At this stage, our production department will prepare your paper for publication. This includes ensuring the following:

* All references, tables, and figures are properly cited

* All relevant supporting information is included in the manuscript submission,

* There are no issues that prevent the paper from being properly typeset

You will receive further instructions from the production team, including instructions on how to review your proof when it is ready. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few days to review your paper and let you know the next and final steps.

Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

If we can help with anything else, please email us at customercare@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Dr. Chen Ling

Academic Editor

PLOS ONE

Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 File. Supplemental materials.

    (DOCX)

    pone.0325330.s001.docx (42KB, docx)
    S2 File. PRISMA checklist.

    (DOCX)

    pone.0325330.s002.docx (190.5KB, docx)
    Attachment

    Submitted filename: Respond to Reviewers comments.docx

    pone.0325330.s004.docx (26.5KB, docx)
    Attachment

    Submitted filename: Respond_to_Reviewers_comments_auresp_2.docx

    pone.0325330.s005.docx (19.9KB, docx)

    Data Availability Statement

    All relevant data are within the manuscript and its Supporting Information files.


    Articles from PLOS One are provided here courtesy of PLOS

    RESOURCES