Table 3.
List of key resources
REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Antibodies | ||
α-synuclein (1:1000 dilution for Western blot) (1:250 dilution for IF) | GeneTex | 112799, RRID: AB_10618470 |
DNAJB1 (1:1000 dilution) | Enzo Life Science | ADI-SPA-400-D, RRID: AB_2039237 |
DNAJB2 (1:500 dilution) | GeneTex | 104464, RRID: AB_1950126 |
DNAJB6 (1:2000 dilution) | Abcam | 198995, RRID: AB_2924896 |
GAPDH (1:1000 dilution) | GeneTex | 100118, RRID: AB_1080976 |
β-actin (1:2000 dilution) | Proteintech | 60008-1-Ig, RRID: AB_2289225 |
HSPA8 (1:1000 dilution) | Novus | 120-2788, RRID: AB_2120309 |
V5 (1:2000 dilution for Western blot) (1:250 dilution for IF) | Thermo Fisher Scientific | R960-25, RRID: AB_2556564 |
V5 (1:100 dilution for IF) | GeneTex | 29137, RRID: AB_370778 |
GBA (1:200 dilution for IF) | GeneTex | 101267, RRID: AB_10724323 |
HSPA1A (1:1000 dilution) | Santa Cruz | 66048, RRID: AB_832518 |
p-EGFR(Y1068) (1:500 dilution) | Cell Signaling Technology | 3777, RRID: AB_2096270 |
EGFR (1:1000 dilution for Western blot) (1:100 dilution for IF) | Cell Signaling Technology | 4267, RRID: AB_2895042 |
p-AKT(S473) (1:1000 dilution) | Cell Signaling Technology | 9271, RRID: AB_329825 |
AKT (1:1000 dilution) | Cell Signaling Technology | 9272, RRID: AB_329827 |
EEA1 (1:200 dilution for IF) | GeneTex | 634169, RRID: AB_2888419 |
CD107a (LAMP-1) (1:200 dilution for IF) | Invitrogen | 14-1079-80, RRID: AB_467426 |
SQSTM1/P62 (1:200 dilution for IF) | GeneTex | 629890, RRID: AB_2885144 |
p-Y5 (1:250 dilution for WB) (1:500 dilution for In vitro kinase assay) | This study | N/A |
AlexaFluorR 594 Goat Anti-mouse IgG (H + L) (1:200 dilution) | Invitrogen | A11005 |
Alexa Fluor™ 647 Goat anti-Rabbit IgG (H + L) (1:200 dilution) | Invitrogen | A21245 |
CyTM5-conjugated AffiniPure Goat Anti-Rabbit IgG (H + L) (1:200 dilution) | Jackson ImmunoResearch | 111-175-144 |
AlexaFluorR 488 Chicken Anti-goat IgG (H + L) (1:200 dilution) | Invitrogen | A21467 |
Biological sample | ||
Human brain whole tissue lysate- adult whole normal | Novus | 820-59177, Lot# C511134 |
Human brain whole tissue lysate- adult whole PD’s human | Novus | 820-59407, Lot# C103261 |
Human brain whole tissue lysate- normal | GeneTex | 28771, Lot# 822400674 |
Human brain whole tissue lysate- PD | GeneTex | 26602, Lot# 822400902 |
Human brain whole tissue lysate- adult whole normal | Novus | 820-59177, Lot# C807591 |
Human brain whole tissue lysate- adult whole PD’s human | Novus | 820-59407, Lot# C308158 |
Chemicals, peptides, and recombinant proteins | ||
DMEM | Cytiva | SH30022.02 |
DMEM/F12 | Cytiva | SH30023.02 |
Rotenone | Sigma-Aldrich | R8875 |
Polybrene | Millipore | TR-1003 |
Protein G Mag Sepharose Xtra magnetic beads | Cytiva | 28967070 |
LuminataTM Crescendo Western HRP Substrate | Millipore | WBLUR0500 |
DAPI | Thermo Fisher Scientifics | D1306 |
FluoromountTM Aqueous Mounting Medium | Sigma-Aldrich | F4680 |
T-Pro non-liposome transfection reagent II | T-Pro Biotechnology | JT97-N002M |
LipofectamineTM LTX reagent with PLUSTM reagent | Thermo Fisher Scientific | 15338100 |
Duolink® In Situ Wash Buffers, Fluorescence | Merck | DUO82049 |
Duolink® In Situ PLA® Probe Anti-Mouse PLUS | Merck | DUO92001 |
Duolink® In Situ PLA® Probe Anti-Rabbit MINUS | Merck | DUO92005 |
Duolink® In Situ Detection Reagents Red | Merck | DUO92008 |
NVP-AEW541 | MedChem Express | HY-50866 |
Afatinib | MedChem Express | HY-10261 |
Complete EDTA-free Protease Inhibitor Cocktail | Roche | 11836170001 |
PhosSTOP Phosphatase Inhibitors | Roche | 04906837001 |
Puromycin | Sigma-Aldrich | P8833 |
EGFR Active human recombinant | Sigma-Aldrich | SRP0239 |
TRIzol | Thermo Fisher Scientifics | 15596018 |
Chloroform | Sigma-Aldrich | 32211 |
Experimental models: Cell lines | ||
SH-SY5Y (H.sapiens) | ATCC | CRL-2266 |
293 T (H.sapiens) | ATCC | CRL-3216 |
Recombinant DNA | ||
Please see Table S1 for a complete list of this study | N/A | N/A |
Software and algorithms | ||
Zen Blue2.6 | Zeiss | N/A |
ImageJ | National Institutes of Health | https://imagej.nih.gov/ij/ |
BioRender | N/A | https://biorender.com/ |
Other | ||
ChemiDoc™ Imaging System | Bio-Rad | 12003153 |
96-well dot-blot apparatus | Bio-Rad | 170-6545 |
Polyvinylidene difluoride membrane | Millipore | IPVH85R |
0.2 μm cellulose acetate membranes | Sterlitech | CA023001 |
SulfoLink™ Immobilization Kit for Peptides | Thermo Scientific | 44999 |
KAPA SYBR FAST | KAPA Biosystems | KK4600 |
Maxima First Strand cDNA Synthesis Kit for RT-qPCR | Thermo Fisher Scientific | K1642 |