TABLE 5.
Nucleotide sequence comparison of horB and horC homologs identified in four distinct species of beer spoilage lactic acid bacteriaa
| ORF |
L. lindneri DSM 20692
|
L. brevis ABBC45C
|
L. paracollinoides DSM 15502T
|
P. damnosus ABBC478
|
||||
|---|---|---|---|---|---|---|---|---|
| Size (bp) | Identity (%)b | Size (bp) | Identity (%) | Size (bp) | Identity (%) | Size (bp) | Identity (%) | |
| horB | 573 | NDc | 573 | 99.3 (569/573) | 573 | 99.3 (569/573) | 573 | 99.5 (570/573) |
| horC | 1,305 | ND | 1,287 | 96.7 (1,244/1,287) | 1,263 | 99.4 (1,252/1,260) | 1,335 | 96.6 (1,260/1,305) |
a
The sequences of DSM 20692, ABBC45C, DSM15502T, and ABBC478 have been deposited in DDBJ under accession numbers AB191156, AB118106, AB159716, and AB159715, respectively.
b
The nucleotide sequence identities with horBL and horCL are expressed as the percentage of the number of matched nucleotides in the aligned sequences shown in parentheses.
c
ND, not determined.