2. RMSD Comparisons between Different Modeling Approaches and Experimental Structures, Showing Both Unpruned and Pruned (in Parentheses) Values in Ångstroms.
| PDB ID | hybrid with AF templates RMSD | hybrid with human AF RMSD | AF3 vs Exp. RMSD | AF2 vs Exp. RMSD |
|---|---|---|---|---|
| 6D9H | 2.594 (0.879) | 2.615 (0.871) | 2.630 (0.938) | 2.594 (0.879) |
| 7AUE | 1.715 (1.126) | 1.760 (1.028) | 2.606 (1.095) | 1.760 (1.028) |
| 7F4D | 1.698 (1.121) | 1.403 (0.922) | 1.841 (1.034) | 1.403 (0.922) |
| 7F53 | 1.145 (0.949) | 1.767 (0.919) | 1.741 (0.777) | 1.766 (0.914) |
| 7LD3 | 2.374 (0.857) | 2.490 (0.905) | 2.554 (0.992) | 2.491 (0.914) |
| 7PIU | 2.357 (0.960) | 1.538 (0.929) | 2.263 (0.804) | 1.537 (0.903) |
| 7WKD | 1.959 (1.008) | 1.961 (0.990) | 1.928 (1.017) | 3.359 (0.930) |
| 7X1T | 2.078 (1.061) | 2.080 (1.060) | 2.057 (1.021) | 2.081 (1.057) |
| 8EFB | 1.539 (0.807) | 1.520 (0.813) | 3.173 (1.018) | 1.526 (1.067) |
| 8F7Q | 1.554 (0.860) | 1.588 (0.864) | 3.096 (1.107) | 1.560 (1.035) |
| 8F7W | 2.715 (1.105) | 2.725 (1.118) | 3.168 (1.109) | 2.727 (0.858) |
| 8F7X | 1.835 (0.954) | 3.010 (1.032) | 3.205 (1.008) | 3.010 (1.118) |
| 8HDO | 3.428 (1.016) | 3.333 (1.006) | 3.279 (0.959) | 3.340 (1.033) |
| 8HTI | 1.903 (1.022) | 1.905 (1.048) | 2.159 (0.874) | 2.008 (0.998) |
| 8ZPS | 2.454 (1.053) | 2.492 (1.059) | 2.565 (1.107) | 2.492 (1.071) |