ACC	Adrenocortical carcinoma
AUC	Area under the curve, reflects diagnostic performance from ROC analysis
BLCA	Bladder urothelial carcinoma
BRCA	Breast invasive carcinoma
CESC	Cervical squamous cell carcinoma and endocervical adenocarcinoma
CHOL	Cholangiocarcinoma
COAD	Colon adenocarcinoma
DFS	Disease-free survival
DLBC	Lymphoid Neoplasm Diffuse Large B-cell Lymphoma
ESCA	Esophageal carcinoma
ESTIMATE	Estimation of STromal and Immune cells in MAlignant Tumor tissues using Expression data
FPKM	Fragments Per Kilobase of transcript per Million mapped reads
GBM	Glioblastoma multiforme
GEPIA	Gene Expression Profiling Interactive Analysis, a web tool for RNA-seq expression analysis
GSEA	Gene set enrichment analysis
GTEx	Genotype-Tissue Expression, a resource for studying gene expression across tissues
HR	Hazard ratio
HNSC	Head and neck squamous cell carcinoma
KICH	Kidney chromophobe
KIRC	Kidney renal clear cell carcinoma
KIRP	Kidney renal papillary cell carcinoma
LAML	Acute myeloid leukemia
LGG	Brain lower-grade glioma
LIHC	Liver hepatocellular carcinoma
LUAD	Lung adenocarcinoma
LUSC	Lung squamous cell carcinoma
MESO	Mesothelioma
MSI	Microsatellite instability, a form of genetic hypermutability caused by impaired DNA mismatch repair
OS	Overall survival
OV	Ovarian serous cystadenocarcinoma
PAAD	Pancreatic adenocarcinoma
PCPG	Pheochromocytoma and paraganglioma
PRAD	Prostate adenocarcinoma
READ	Rectum adenocarcinoma
ROC	Receiver operating characteristic, a graphical plot to assess diagnostic accuracy;
SARC	Sarcoma
SKCM	Skin cutaneous melanoma
SPSS	Statistical Package for the Social Sciences
STAD	Stomach adenocarcinoma
TCGA	The Cancer Genome Atlas
TE	Transposable element
TFH	T follicular helper
TGCT	Testicular germ cell tumor
THCA	Thyroid carcinoma
THYM	Thymoma
TIGD1	Trigger Transposable Element Derived 1
TISIDB	The Tumor–Immune System Interactions Database
TME	The tumor microenvironment
TMB	Tumor mutational burden, a measure of the number of mutations within a tumor genome
Tregs	T regulatory cells
UCEC	Uterine Corpus Endometrial Carcinoma
UCS	Uterine carcinosarcoma
UVM, UM	Uveal melanoma
WHO	The World Health Organization