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. 1999 Aug 1;341(Pt 3):473–476.

Effect of CWG methylation on expression of plant genes.

S Pradhan 1, N A Urwin 1, G I Jenkins 1, R L Adams 1
PMCID: PMC1220381  PMID: 10417307

Abstract

The presence of two DNA methyltransferases in Pisum raises the possibility that they serve different functions. In vitro methylation of CWG sequences in the strong cauliflower mosaic virus 35S promoter had no effect on reporter gene expression. In contrast, in vitro methylation of CWG sequences in the relatively weak, CG-deficient Phaseolus vulgaris rbcS2 promoter inhibited transcription. Expression of both constructs was strongly inhibited by extensive CG methylation. A search of published plant promoter sequences revealed that the CG content of promoters is very variable, with some promoters having typical CG islands. In contrast, the distribution of CWG sequences is more even with little evidence for CWG islands.

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Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Antequera F., Bird A. P. Unmethylated CpG islands associated with genes in higher plant DNA. EMBO J. 1988 Aug;7(8):2295–2299. doi: 10.1002/j.1460-2075.1988.tb03072.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Bevan M., Bancroft I., Bent E., Love K., Goodman H., Dean C., Bergkamp R., Dirkse W., Van Staveren M., Stiekema W. Analysis of 1.9 Mb of contiguous sequence from chromosome 4 of Arabidopsis thaliana. Nature. 1998 Jan 29;391(6666):485–488. doi: 10.1038/35140. [DOI] [PubMed] [Google Scholar]
  3. Diéguez M. J., Vaucheret H., Paszkowski J., Mittelsten Scheid O. Cytosine methylation at CG and CNG sites is not a prerequisite for the initiation of transcriptional gene silencing in plants, but it is required for its maintenance. Mol Gen Genet. 1998 Aug;259(2):207–215. doi: 10.1007/s004380050806. [DOI] [PubMed] [Google Scholar]
  4. Donald R. G., Cashmore A. R. Mutation of either G box or I box sequences profoundly affects expression from the Arabidopsis rbcS-1A promoter. EMBO J. 1990 Jun;9(6):1717–1726. doi: 10.1002/j.1460-2075.1990.tb08295.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Gilmartin P. M., Sarokin L., Memelink J., Chua N. H. Molecular light switches for plant genes. Plant Cell. 1990 May;2(5):369–378. doi: 10.1105/tpc.2.5.369. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Gruenbaum Y., Naveh-Many T., Cedar H., Razin A. Sequence specificity of methylation in higher plant DNA. Nature. 1981 Aug 27;292(5826):860–862. doi: 10.1038/292860a0. [DOI] [PubMed] [Google Scholar]
  7. Hershkovitz M., Gruenbaum Y., Renbaum P., Razin A., Loyter A. Effect of CpG methylation on gene expression in transfected plant protoplasts. Gene. 1990 Oct 15;94(2):189–193. doi: 10.1016/0378-1119(90)90386-6. [DOI] [PubMed] [Google Scholar]
  8. Kass S. U., Goddard J. P., Adams R. L. Inactive chromatin spreads from a focus of methylation. Mol Cell Biol. 1993 Dec;13(12):7372–7379. doi: 10.1128/mcb.13.12.7372. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Pradhan S., Adams R. L. Distinct CG and CNG DNA methyltransferases in Pisum sativum. Plant J. 1995 Mar;7(3):471–481. doi: 10.1046/j.1365-313x.1995.7030471.x. [DOI] [PubMed] [Google Scholar]
  10. Seed B., Sheen J. Y. A simple phase-extraction assay for chloramphenicol acyltransferase activity. Gene. 1988 Jul 30;67(2):271–277. doi: 10.1016/0378-1119(88)90403-9. [DOI] [PubMed] [Google Scholar]
  11. Staiger D., Kaulen H., Schell J. A CACGTG motif of the Antirrhinum majus chalcone synthase promoter is recognized by an evolutionarily conserved nuclear protein. Proc Natl Acad Sci U S A. 1989 Sep;86(18):6930–6934. doi: 10.1073/pnas.86.18.6930. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Urwin N. A., Jenkins G. I. A sucrose repression element in the Phaseolus vulgaris rbcS2 gene promoter resembles elements responsible for sugar stimulation of plant and mammalian genes. Plant Mol Biol. 1997 Dec;35(6):929–942. doi: 10.1023/a:1005950915499. [DOI] [PubMed] [Google Scholar]
  13. Williams M. E., Foster R., Chua N. H. Sequences flanking the hexameric G-box core CACGTG affect the specificity of protein binding. Plant Cell. 1992 Apr;4(4):485–496. doi: 10.1105/tpc.4.4.485. [DOI] [PMC free article] [PubMed] [Google Scholar]

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