| REAGENT or RESOURCE | SOURCE | IDENTIFIER |
|---|---|---|
| Antibodies | ||
| eFluor 450 anti-mouse CD326 (EpCAM) monoclonal antibody (clone G8.8) | eBioscience | Cat# 48-5791-82, RRID:AB_10717090 |
| BV480 rat anti-mouse CD4 (clone RM4-5) | BD Biosciences | Cat# 565634, RRID:AB_2739312 |
| Alexa Fluor 488 rat anti-mouse CD4 (clone RM4-5) | BD Biosciences | Cat# 557667, RRID:AB_396779 |
| Alexa Fluor 647 rat anti-mouse CD4 (clone RM4-5) | BD Biosciences | Cat# 557681, RRID:AB_396791 |
| Alexa Fluor 594 anti-mouse CD326 (Ep-CAM) antibody (clone G8.8) | BioLegend | Cat# 118222, RRID:AB_2563322 |
| Alexa Fluor 488 anti-mouse CD3 antibody (clone 17A2) | BioLegend | Cat# 100210, RRID:AB_389301 |
| Alexa Fluor 647 anti-mouse CD31 antibody (clone MEC13.3) | BioLegend | Cat# 102516, RRID:AB_2161029 |
| Alexa Fluor 488 anti-mouse F4/80 monoclonal antibody (clone BM8) | eBioscience | Cat# 53-4801-82, RRID:AB_469915 |
| BV480 rat anti-mouse CD45R/B220 (clone RA3-6B2) | BD Biosciences | Cat# 565631, RRID:AB_2739311 |
| CD45R (B220) monoclonal antibody (RA3-6B2), eFluor 450 | eBioscience | Cat# 48-0452-82, RRID: AB_1548761 |
| Alexa Fluor 647 anti-mouse CD8a antibody (clone 53–6.7) | BioLegend | Cat# 100724, RRID: AB_389326 |
| CD4 monoclonal antibody (RM4-5), Alexa Fluor 700 | eBioscience | Cat# 56-0042-82, RRID:AB_494000 |
| Alexa Fluor 488 anti-mouse LYVE1 monoclonal antibody (clone ALY7) | eBioscience | Cat# 53-0443-82, RRID:AB_1633415 |
| LYVE1 monoclonal antibody (ALY7), eFluor 450 | eBioscience | Cat# 48-0443-80, RRID: AB_2784722 |
| Alexa Fluor 488 anti-GFP antibody | BioLegend | Cat# 338008, RRID: AB_2563287 |
| eFluor 570 anti-mouse Foxp3 monoclonal antibody (clone FJK-16s) | eBioscience | Cat# 41-5773-82, RRID:AB_11219073 |
| Alexa Fluor 647 mouse anti-Ki-67 (clone B56) | BD Biosciences | Cat# 561126, RRID:AB_10611874 |
| Alexa Fluor 700 mouse anti-Ki-67 (clone B56) | BD Biosciences | Cat# 561277, RRID:AB_10611571 |
| BV480 rat anti-mouse CD8a (clone ALY7) | BD Biosciences | Cat# 566096, RRID:AB_2739500 |
| Goat anti-rabbit IgG (H + L) cross-adsorbed secondary antibody, Alexa Fluor 647 | Invitrogen | Cat# A-21244, RRID:AB_2535812 |
| Chemicals, peptides, and recombinant proteins | ||
| Fixation and permeabilization solution | BD Biosciences | Cat# 554722 |
| Normal goat serum | Jackson ImmunoResearch Laboratories, Inc. | Cat# 005-000-121, RRID: AB_2336990 |
| Normal mouse serum | Jackson ImmunoResearch Laboratories, Inc. | Cat# 015-000-120, RRID: AB_2337194 |
| Normal rabbit serum | Jackson ImmunoResearch Laboratories, Inc. | Cat# 011-000-120, RRID: AB_2337123 |
| Normal rat serum | Jackson ImmunoResearch Laboratories, Inc. | Cat# 012-000-120, RRID: AB_2337141 |
| PBS | HyClone | Cat# SH30256.01 |
| Triton X-100 | Sangon Biotech | Cat#A600198-0500 |
| Tissue-Tek O.C.T. compound | Sakura Finetek | Cat# 4583 |
| Sucrose | Sigma-Aldrich | Cat# v900116 |
| Fluoromount-G | SouthernBiotech | Cat# 0100-01 |
| DAPI | Sigma-Aldrich | Cat# D9542 |
| Bovine serum albumin | Sigma-Aldrich | Cat# B2064-100G |
| Experimental models: Organisms/strains | ||
| Mouse: ApcMin/+ | The Jackson Laboratory | JAX: 002020 |
| Mouse: C57BL/6 | The Jackson Laboratory | JAX: 000664 |
| Mouse: Foxp3DTR | The Jackson Laboratory | JAX:016958 |
| Software and algorithms | ||
| Prism 8 | GraphPad | https://www.graphpad.com/ |
| Imaris 10.0 | Bitplane | https://imaris.oxinst.com/ |
| R 4.3.2 | N/A | https://www.r-project.org/ |
| Python 2.7 | N/A | https://www.python.org/ |
| Leica LAS X Suite software | Leica | N/A |
| Other | ||
| Charged slides | Premiere | Cat# 9308W |
| Standard NorGlas microscope cover glass | MeVid | Cat# CS01-2450 |
| Reagent reservoirs, 7 mL, 8 channels | Sangon Biotech | Cat#F619713-0001 |
| Hydrophobic Barrier PAP Pen | Vector | Cat# H-4000 |
| Leica CM1950 cryostat | Leica | CM1950 |
| Leica TCS SP8 | Leica | N/A |
| Leica STELLARIS 8 STED | Leica | N/A |