Table 2.

Repetitive elements sequence statistics of the assembled genome.

Type				Number of elements	Length of sequence (bp)	Percentage of sequence (%)
TEs	Class I	LINE	L2	4,919	746,213	0.20
			Unknown	43,018	7,569,999	2.08
			I-Jockey	3,377	529,766	0.15
			RTE-RTE	3,253	859,132	0.24
			R1	1,414	733,018	0.20
			Other	4,310	459,257	0.13
		LTR	Unknown	42,629	7,267,293	1.99
			Gypsy	8,329	1,639,811	0.45
			Pao	3,007	1,311,568	0.36
			Copia	7,480	2,085,659	0.57
			Other	3,372	385,307	0.11
		SINE	Unknown	8,093	666,156	0.18
			tRNA-Core-RTE	1,795	429,843	0.12
			Other	2,191	621,833	0.17
	Class II	DNA	Kolobok-T2	5,320	428,734	0.12
			TcMar-Tc1	5,396	982,730	0.27
			Unknown	571,953	118,603,002	32.54
			Maverick	6,470	1,382,554	0.38
			hAT-Ac	29,650	4,379,726	1.20
			Crypton-I	6,606	949,425	0.26
			CMC-Chapaev-3	1,962	813,420	0.22
			CMC-EnSpm	2,602	2,788,889	0.77
			TcMar-Fot1	1,893	514,523	0.14
			Academ-1	1,404	469,109	0.13
			TcMar-Mariner	6,415	1,991,663	0.55
			Other	19,541	2,482,897	0.68
		MITE	Unknown	57,951	14,793,825	4.06
		RC	Helitron	19,071	3,650,110	1.00
	Total TEs			873,421	179,535,462	49.25
Tandem Repeats		tandem_repeat		13,129	1,250,566	0.34
		SSR		10,466	123,925	0.03
		Total		23,595	1,374,491	0.38
Simple repeats				2,243	340,996	0.09
Unknown				97,246	15,186,412	4.17
Other				1,759	303,452	0.08
Low complexity				105	14,424	0.00
Total Repeats				998,369	196,755,237	53.98