Table 2.
Statistical table of assembly results.
| Sample ID | Contig numbers | Total length (bp) | Largest length (bp) | N50 (bp) | GC (%) | Mapped (%) |
|---|---|---|---|---|---|---|
| DM1 | 542,147 | 663,647,397 | 19,067 | 1,802 | 36.81 | 99.16 |
| DM2 | 576,213 | 656,313,157 | 17,411 | 1,612 | 36.80 | 99.07 |
| DM3 | 586,992 | 655,410,243 | 21,887 | 1,559 | 36.86 | 99.13 |
| DM4 | 600,988 | 648,912,080 | 16,911 | 1,476 | 36.79 | 98.74 |
| DM5 | 560,055 | 652,035,236 | 21,724 | 1,666 | 36.79 | 98.98 |
| DM6 | 541,951 | 749,569,994 | 31,721 | 2,342 | 37.43 | 99.44 |
| SB1 | 572,327 | 659,045,269 | 21,904 | 1,660 | 36.37 | 99.17 |
| SB2 | 585,496 | 656,769,512 | 16,863 | 1,596 | 36.30 | 99.10 |
| SB3 | 578,067 | 646,948,786 | 62,921 | 1,585 | 36.40 | 98.61 |
| SB4 | 570,251 | 668,883,798 | 24,264 | 1,724 | 36.37 | 99.06 |
| TY1 | 346,293 | 567,719,182 | 30,601 | 2,884 | 38.14 | 98.85 |
| TY2 | 299,638 | 564,673,231 | 46,385 | 3,716 | 38.07 | 99.43 |
| TY3 | 299,168 | 569,806,024 | 54,071 | 3,901 | 38.03 | 99.45 |
| TY4 | 310,963 | 565,928,600 | 34,725 | 3,499 | 38.05 | 99.15 |
DM, Diptychus maculatus; SB, Schizothorax biddulphi; TY, Triplophysa yarkandensis. Contig numbers: the number of contigs after assembly. Total length: the sum of the bases of all contigs. Largest length: the longest contig base number. N50 is defined as the length of the contig at which the cumulative length first reaches or exceeds half of the total length of all contigs. (Contigs are arranged in descending order based on their lengths, and the cumulative length is calculated progressively.) Mapped: the ratio of sequencing reads to assembled contigs.